Literature DB >> 27656195

Structural biology of the macroautophagy machinery.

Leon H Chew1, Calvin K Yip1.   

Abstract

Macroautophagy is a conserved degradative process mediated through formation of a unique double-membrane structure, the autophagosome. The discovery of autophagy-related (Atg) genes required for autophagosome formation has led to the characterization of approximately 20 genes mediating this process. Recent structural studies of the Atg proteins have provided the molecular basis for their function. Here we summarize the recent progress in elucidating the structural basis for autophagosome formation.

Keywords:  Atg proteins; X-ray crystallography; autophagy; macroautophagy; single-particle electron microscopy; structural biology

Year:  2014        PMID: 27656195      PMCID: PMC5028197          DOI: 10.1007/s11515-014-1293-3

Source DB:  PubMed          Journal:  Front Biol (Beijing)        ISSN: 1674-7984


  138 in total

1.  Apg1p, a novel protein kinase required for the autophagic process in Saccharomyces cerevisiae.

Authors:  A Matsuura; M Tsukada; Y Wada; Y Ohsumi
Journal:  Gene       Date:  1997-06-19       Impact factor: 3.688

2.  Atg21 is a phosphoinositide binding protein required for efficient lipidation and localization of Atg8 during uptake of aminopeptidase I by selective autophagy.

Authors:  Per E Strømhaug; Fulvio Reggiori; Ju Guan; Chao-Wen Wang; Daniel J Klionsky
Journal:  Mol Biol Cell       Date:  2004-05-21       Impact factor: 4.138

Review 3.  The LIR motif - crucial for selective autophagy.

Authors:  Åsa Birna Birgisdottir; Trond Lamark; Terje Johansen
Journal:  J Cell Sci       Date:  2013-08-01       Impact factor: 5.285

4.  Structure of GATE-16, membrane transport modulator and mammalian ortholog of autophagocytosis factor Aut7p.

Authors:  Y Paz; Z Elazar; D Fass
Journal:  J Biol Chem       Date:  2000-08-18       Impact factor: 5.157

5.  Characterization of p150, an adaptor protein for the human phosphatidylinositol (PtdIns) 3-kinase. Substrate presentation by phosphatidylinositol transfer protein to the p150.Ptdins 3-kinase complex.

Authors:  C Panaretou; J Domin; S Cockcroft; M D Waterfield
Journal:  J Biol Chem       Date:  1997-01-24       Impact factor: 5.157

6.  Isolation and characterization of autophagy-defective mutants of Saccharomyces cerevisiae.

Authors:  M Tsukada; Y Ohsumi
Journal:  FEBS Lett       Date:  1993-10-25       Impact factor: 4.124

7.  Role of membrane association and Atg14-dependent phosphorylation in beclin-1-mediated autophagy.

Authors:  Adam I Fogel; Brian J Dlouhy; Chunxin Wang; Seung-Wook Ryu; Albert Neutzner; Samuel A Hasson; Dionisia P Sideris; Hagai Abeliovich; Richard J Youle
Journal:  Mol Cell Biol       Date:  2013-07-22       Impact factor: 4.272

8.  LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation.

Authors:  Yukiko Kabeya; Noboru Mizushima; Akitsugu Yamamoto; Satsuki Oshitani-Okamoto; Yoshinori Ohsumi; Tamotsu Yoshimori
Journal:  J Cell Sci       Date:  2004-06-01       Impact factor: 5.285

9.  Global analysis of fission yeast mating genes reveals new autophagy factors.

Authors:  Ling-Ling Sun; Ming Li; Fang Suo; Xiao-Man Liu; En-Zhi Shen; Bing Yang; Meng-Qiu Dong; Wan-Zhong He; Li-Lin Du
Journal:  PLoS Genet       Date:  2013-08-08       Impact factor: 5.917

10.  Apg9p/Cvt7p is an integral membrane protein required for transport vesicle formation in the Cvt and autophagy pathways.

Authors:  T Noda; J Kim; W P Huang; M Baba; C Tokunaga; Y Ohsumi; D J Klionsky
Journal:  J Cell Biol       Date:  2000-02-07       Impact factor: 10.539

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  2 in total

1.  Subnanometer resolution cryo-EM structure of Arabidopsis thaliana ATG9.

Authors:  Louis Tung Faat Lai; Chuanyang Yu; Jan Siu Kei Wong; Ho Sing Lo; Samir Benlekbir; Liwen Jiang; Wilson Chun Yu Lau
Journal:  Autophagy       Date:  2019-07-16       Impact factor: 16.016

Review 2.  Recent Advances in Single-Particle Electron Microscopic Analysis of Autophagy Degradation Machinery.

Authors:  Yiu Wing Sunny Cheung; Sung-Eun Nam; Calvin K Yip
Journal:  Int J Mol Sci       Date:  2020-10-28       Impact factor: 5.923

  2 in total

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