Literature DB >> 20426037

Task-optimal registration cost functions.

B T Thomas Yeo1, Mert Sabuncu, Polina Golland, Bruce Fischl.   

Abstract

In this paper, we propose a framework for learning the parameters of registration cost functions--such as the tradeoff between the regularization and image similiarity term--with respect to a specific task. Assuming the existence of labeled training data, we specialize the framework for the task of localizing hidden labels via image registration. We learn the parameters of the weighted sum of squared differences (wSSD) image similarity term that are optimal for the localization of Brodmann areas (BAs) in a new subject based on cortical geometry. We demonstrate state-of-the-art localization of V1, V2, BA44 and BA45.

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Mesh:

Year:  2009        PMID: 20426037      PMCID: PMC2863151          DOI: 10.1007/978-3-642-04268-3_74

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  11 in total

1.  Broca's region revisited: cytoarchitecture and intersubject variability.

Authors:  K Amunts; A Schleicher; U Bürgel; H Mohlberg; H B Uylings; K Zilles
Journal:  J Comp Neurol       Date:  1999-09-20       Impact factor: 3.215

2.  High-resolution intersubject averaging and a coordinate system for the cortical surface.

Authors:  B Fischl; M I Sereno; R B Tootell; A M Dale
Journal:  Hum Brain Mapp       Date:  1999       Impact factor: 5.038

3.  Incorporating statistical measures of anatomical variability in atlas-to-subject registration for conformal brain radiotherapy.

Authors:  Olivier Commowick; Radu Stefanescu; Pierre Fillard; Vincent Arsigny; Nicholas Ayache; Xavier Pennec; Grégoire Malandain
Journal:  Med Image Comput Comput Assist Interv       Date:  2005

4.  A log-Euclidean framework for statistics on diffeomorphisms.

Authors:  Vincent Arsigny; Olivier Commowick; Xavier Pennec; Nicholas Ayache
Journal:  Med Image Comput Comput Assist Interv       Date:  2006

5.  Probabilistic brain atlas encoding using Bayesian inference.

Authors:  Koen Van Leemput
Journal:  Med Image Comput Comput Assist Interv       Date:  2006

6.  Diffeomorphic demons: efficient non-parametric image registration.

Authors:  Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

7.  Effects of registration regularization and atlas sharpness on segmentation accuracy.

Authors:  B T Thomas Yeo; Mert R Sabuncu; Rahul Desikan; Bruce Fischl; Polina Golland
Journal:  Med Image Anal       Date:  2008-06-19       Impact factor: 8.545

8.  Unbiased diffeomorphic atlas construction for computational anatomy.

Authors:  S Joshi; Brad Davis; Matthieu Jomier; Guido Gerig
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

9.  Automatic anatomical brain MRI segmentation combining label propagation and decision fusion.

Authors:  Rolf A Heckemann; Joseph V Hajnal; Paul Aljabar; Daniel Rueckert; Alexander Hammers
Journal:  Neuroimage       Date:  2006-07-24       Impact factor: 6.556

10.  Cortical folding patterns and predicting cytoarchitecture.

Authors:  Bruce Fischl; Niranjini Rajendran; Evelina Busa; Jean Augustinack; Oliver Hinds; B T Thomas Yeo; Hartmut Mohlberg; Katrin Amunts; Karl Zilles
Journal:  Cereb Cortex       Date:  2007-12-12       Impact factor: 5.357

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  5 in total

1.  Learning task-optimal registration cost functions for localizing cytoarchitecture and function in the cerebral cortex.

Authors:  B T Thomas Yeo; Mert R Sabuncu; Tom Vercauteren; Daphne J Holt; Katrin Amunts; Karl Zilles; Polina Golland; Bruce Fischl
Journal:  IEEE Trans Med Imaging       Date:  2010-06-07       Impact factor: 10.048

Review 2.  FreeSurfer.

Authors:  Bruce Fischl
Journal:  Neuroimage       Date:  2012-01-10       Impact factor: 6.556

3.  Evaluating volumetric brain registration performance using structural connectivity information.

Authors:  Aleksandar Petrović; Lilla Zöllei
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

4.  Spherical demons: fast diffeomorphic landmark-free surface registration.

Authors:  B T Thomas Yeo; Mert R Sabuncu; Tom Vercauteren; Nicholas Ayache; Bruce Fischl; Polina Golland
Journal:  IEEE Trans Med Imaging       Date:  2009-08-25       Impact factor: 10.048

5.  DT-REFinD: diffusion tensor registration with exact finite-strain differential.

Authors:  B T Thomas Yeo; Tom Vercauteren; Pierre Fillard; Jean-Marc Peyrat; Xavier Pennec; Polina Golland; Nicholas Ayache; Olivier Clatz
Journal:  IEEE Trans Med Imaging       Date:  2009-06-23       Impact factor: 10.048

  5 in total

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