| Literature DB >> 20423813 |
Abstract
BACKGROUND: Air pollution is thought to exert health effects through oxidative stress, which causes damage to DNA and lipids.Entities:
Mesh:
Substances:
Year: 2010 PMID: 20423813 PMCID: PMC2920082 DOI: 10.1289/ehp.0901725
Source DB: PubMed Journal: Environ Health Perspect ISSN: 0091-6765 Impact factor: 9.031
Summary of biomarkers of oxidatively damaged DNA, nucleobases, and LPO products used in studies of the effect of combustion particles.
| Biomolecule | Description | Assays |
|---|---|---|
| Oxidatively damaged DNA or nucleobases | ||
| ENDOIII/FPG | DNA base lesions detected by bacterial ENDOIII or FPG enzymes, representing mainly oxidized purine (including 8-oxodG) and pyrimidine lesions, respectively | Comet assay |
| 8-oxodG | Major oxidation product in nuclear DNA; detection of 8-oxodG in urine or plasma mainly originates from oxidation of deoxyguanosine triphosphate in the nucleotide pool | HPLC-ECD, LC-MS/MS, antibodies |
| 8-oxoGua | Major oxidation product in nuclear DNA; detection of 8-oxoGua in urine or plasma is likely to arise from cleavage of the oxidized base from DNA by repair enzymes (e.g., OGG1) | HPLC-ECD, LC-MS/MS, antibodies |
| M1dG | Exocyclic DNA damage formed by reactive carbonyl compounds released from oxidized lipids | LC-MS, antibodies |
| LPO products | ||
| CDs | Breakdown products of fatty acids considered to represent an early stage of the LPO process | Spectrophotometry |
| Lipid hydroperoxides | Reaction product between O2 and carbon radical in lipids | Spectrophotometry |
| MDA/TBARS | Breakdown carbonyl product of LPO; the reaction with thiobarbituric acid forms adducts that can be detected by spectrophotometry; prepurification of urine or plasma before the reaction with thiobarbituric acid can be considered as a specific measurement of LPO products, whereas the simple TBARS assay is highly unspecific | Spectrophotometry |
| F2-isoprostanes | Products that arise mainly from oxidation of arachidonic acid in phospholipids, often referred to as 8-iso-PGF2α or 15-F2t-isoprostanes | GC-MS, LC-MS/MS, antibodies |
Abbreviations: 8-oxodG, 8-oxo-7,8-dihydro-2′-deoxyguanosine; 8-oxoGua, 8-oxo-7,8-dihydroguanine; CDs, conjugated dienes; ECD, electrochemical detection; ENDOIII, endonuclease III; FPG, formamidopyrimidine DNA glycosylase; GC-MS, gas chromatography–mass spectrometry; HPLC, high-performance liquid chromatography; LC-MS, liquid chromatography–mass spectrometry; LC-MS/MS, liquid chromatography with tandem mass spectrometry; LPO, lipid peroxidation; M1dG, exocyclic M1 adduct to guanine; MDA, malondialdehyde; OGG1, 8-oxoguanine DNA glycosylase; TBARS, thiobarbituric acid–reactive substances. For descriptions and critical assessments of the assays as biomarkers, see Griffiths et al. (2002) and Halliwell and Whiteman (2004).
Summary of controlled exposure studies on exposure to air pollution PM from combustion processes.
| Biomarker | Subjects ( | Sex, age, smoking | Exposure assessment | Potential measurement error | Findings | Study |
|---|---|---|---|---|---|---|
| 8-oxodG (ELISA) | Subjects with metabolic syndrome exposed to diesel exhaust or FA for 2 hr (10) | MF | PM2.5, 4.8 and 205 μg/m3 | Biomarker (8-oxodG) | No difference in urinary excretion | |
| 8-iso-PGF2 (ELISA) | Healthy subjects exposed to wood smoke in a chamber for 4 hr (13) | MF | PM2.5, 261 and 14–27 μg/m3 | Biomarker (8-iso-PGF2 ) | Increased urinary excretion of 8-iso-PGF and MDA levels in EBC; unaltered FPG sites (WBCs) and 8-oxodG and 8-oxoGua (urine) | |
| FPG sites (comet) | Healthy subjects exposed in a chamber for 24 hr (29) | MF | Personal UFPs, 6,169–15,362 particles/cm3 (non-FA), and 91–542 particles/cm3 (FA) | No | Decreased levels in WBCs by exposure to FA | |
| 8-iso-PGF2 (ELISA) | Elderly subjects exposed in the homes (41) | MF | Personal UFPs, 10,016 particles/cm3 (non-FA) and 3,206 particles/cm3 (FA) | Biomarker | Unaltered urinary excretion | |
| 8-Isoprostane (ELISA) | Subjects with stable coronary heart disease (12) and controls (12) exposed to CAPs for 2 hr | M | UFPs, 99,400 and zero particles/cm3 | Biomarker | Increased in EBC by CAPs exposure | |
| MDA (HPLC) | Subjects exercising in location with low and high traffic intensity (12) | M | Personal UFPs, 252,290 and 7,382 particles/cm3 | No | Increased after exercise at location with high exposure | |
| 8-oxoGua (HPLC-ECD) | Healthy subjects exposed to traffic exhaust at a street intersection for 4 hr (3) | M | None (49,000 cars/12 hr) | Exposure | Increased urinary excretion during the first 12 hr and 24 hr after exposure; normalized levels at 36 and 48 hr after the exposure | |
| FPG sites (comet) | Subjects bicycling in Copenhagen (15) | MF | Personal UFPs (32,400 and 13,400 particles/cm3) | No | Increased after cycling in the traffic compared with cycling in the laboratory |
Abbreviations: ECD, electrochemical detection; ELISA, enzyme-linked immunosorbent assay; FA, filtered air; FD, fluorescence detection; GC-MS, gas chromatography–mass spectrometry; LC-MS, liquid chromatography–mass spectrometry; LC-MS/MS, liquid chromatography with tandem mass spectrometry; M, male; MF, male and female; NO, nitric oxide; NS, nonsmoker; iso-PGF2, 8-iso-PGF2, 8-iso-prostaglandin F2; SO2, sulfur dioxide.
The values represent exposure assessment in the high-exposure and low-exposure group, respectively, unless stated otherwise by specific footnotes.
We calculated the mean and SD from the mean difference and 95% CI assuming no missing data in the pair analysis.
We calculated the net difference in MDA from preexposure values and baseline-adjusted the data according to the level of MDA in the group of subjects exposed to filtered air. The SD was calculated from 90% CI.
We used the mean level of MDA from the exercises at the locations with low and high PM concentration.
The data correspond to the mean of the whole exposure period (0–48 hr).
Summary of cross-sectional studies on exposure to air pollution PM from combustion processes in different areas.
| Biomarker | Subjects ( | Sex, age, smoking | Exposure assessment | Potential measurement error | Findings | Study |
|---|---|---|---|---|---|---|
| FPG sites (comet) | Taxi-motor drivers, people living/working near busy roads and rural controls (135) | M | Ambient (stationary) sampling of UFPs (201,691 and 6,961 particles/cm3) (midday 1-hr concentration in a busy street intersection and town square in a rural village, respectively) and urinary excretion of | Exposure | Association between S-PMA excretion and FPG sites in WBCs | |
| 8-oxodG (HPLC-ECD) | Children living in rural and urban area (75) | M | Benzene (ambient monitoring and personal exposure) | Exposure | Increased in WBCs and urine | |
| 8-oxodG (immunohistochemistry) | Children living in a low-polluted area and Mexico City (98) | MF | O3 (stationary monitoring data) | Biomarker exposure | Higher level in nasal biopsies from children in Mexico City compared with children in the low polluted area | |
| 8-iso-PGF (ELISA) | Subjects living in areas of high and low pollution (120) | MF | PM10, 42.3 (25.7–67.9) and 25.6 (17.8–28.6) ppb | Biomarker exposure | Highest level in plasma of subjects living in the most polluted area | |
| 8-oxodG (ELISA) | Subjects living in Flanders, Belgium (399) | MF | 1-HOP (urine) | Biomarker exposure | Association between exposure biomarkers (1-HOP and | |
| TBARS (SPM) and CDs (SPM) | Medical doctors who lived in (24) or who recently moved to (21) Mexico City and controls (17) | NR | O3, 152 and 29 ppb (stationary monitoring) | Biomarker exposure | No difference in serum level between subjects who had permanently or who had never lived in Mexico City; subjects who had recently (within one week) moved to Mexico City had elevated levels in serum | |
| TBARS (SPM) | Subjects exposed to residential biomass smoke (28) and controls (15) | F | None | Biomarker exposure | Highest level in serum of exposed subjects | |
| CDs | Children living in Isfahan, Iran (374) | MF | PM10, 122 ± 34 μg/m3 NO2, 34 ± 13 ppbO3, 38 ± 12 ppb | Biomarker exposure | Association between PM10 and CDs in plasma | |
| TBARS (SPM) | Subjects living in rural (125) and urban (167) areas of Mexico | MF | O3 (155 vs. 46 ppb) | Biomarker exposure | Highest level in plasma of subjects living in Mexico City | |
| 8-oxodG (HPLC-ECD) | Subjects living in a rural village (100) and two suburbs of Antwerp, Belgium (100) | MF | 1-HOP (urine) | Exposure | Highest level in urine from exposed subjects; no correlations between exposure markers (1-HOP and | |
| 8-oxodG (ELISA) | Children living in areas of low and high air pollution exposure (894) | MF | PM2.5, 22.7 and 16.8 μg/m3 | Biomarker exposure | Positive association between air pollution exposure and urinary excretion of 8-oxodG in the area with high air pollution (Teplice, Czech Republic); same association statistically nonsignificant in the area with low level of air pollution (Prachatice, Czech Republic) | |
| ENDOIII/FPG sites (comet) | Subjects living in Copenhagen, Denmark (40) | MF | Benzene (personal exposure and urinary | Exposure | Positive association between urinary | |
| TBARS (SPM) | Children living in Pancevo (industrial area) and Kovacica (village) in Serbia (128) | NR | None | Biomarker exposure | Highest level in plasma from exposed subjects |
Abbreviations: CDs, conjugated dienes; ECD, electrochemical detection; ELISA, enzyme-linked immunosorbent assay; F, female; M, male; MF, male and female; NR, not reported; NS, nonsmoker; SPM, spectrophotometry; iso-PGF2, 8-iso-PGF2, 8-iso-prostaglandin F2; MDA, malondialdehyde; SO2, sulfur dioxide.
The values represent exposure assessment in the high-exposure and low-exposure group, respectively, unless stated otherwise by specific footnotes.
We used the median and interquartile range as surrogates for the mean and SD.
We used data from Antwerp, Belgium, and a rural area in the analysis because they had emissions of PAHs, and we estimated the SD from the 95% CI.
We calculated the mean level of LPO products from TBARS and CDs.
We used data based on the difference in interquartile range of the exposure (PM10) and assuming that the median concentration of exposure (122 μg/m3) corresponds to the mean level of MDA (0.7 μM) and CDs (2.5 μM). We calculated the SD from the mean coefficient of variation (11%) of the LPO products.
We pooled mean and SD from adult and elderly subjects.
We pooled data from Wilrijk and Hoboken, Belgium, for the analysis and calculated the SD from 95% CI.
We used the mean and SD in the groups of subjects being either higher or lower than the median urinary excretion of S-PMA.
We estimated the SD from 95% CI.
Figure 1Types of errors in studies of the effect of combustion air pollution. oxDNA, oxidatively damaged DNA.
Summary of panel studies on exposure to air pollution PM from combustion processes.
| Biomarker | Subjects ( | Sex, age, smoking | Exposure assessment | Potential measurement error | Findings | Study |
|---|---|---|---|---|---|---|
| 8-oxodG (ELISA) | Students followed for 3 months (76) | MF | PM2.5, 12.7–59.5 μg/m3 | Biomarker exposure | Positive association between 8-oxodG in plasma and SO2 and O3; no association with PM2.5, PM10, and NO2 | |
| TBARS (FD) | Subjects with diabetes mellitus (25) followed for 7 weeks | MF | Personal PM10, 25.5 (9.8–133) μg/m3 | Biomarker | Positive association between PM10 levels and TBARS in plasma | |
| TBARS (FD) | Asthmatics (182) followed for 4 weeks | MF | PM2.5, 2.7–14.3 μg/m3 | Biomarker exposure | Positive association between TBARS in EBC and SO2, NO2 and PM2.5, but not with O3; the concentration of 8-isoprostanes in EBC was only associated with SO2 concentration | |
| TBARS (SPM) | Normal subjects living in Windsor, Ontario, Canada (29) followed for maximally 50 days | MF | PM2.5, 6.3 (0.9–16.6) μg/m3 (personal exposure) and 15.3 (10.4–24.2) μg/m3 (outdoor) | Biomarker | No association with personal PM2.5 exposure and LPO products in plasma; an association with outdoor PM2.5 and TBARS in a subset of subjects without doctor-diagnosed cardiovascular disease or who did not take diabetic medication | |
| TBARS (SPM) | Medical doctors investigated 1 or 16 weeks after arrival in Mexico City (21) | NR | O3, 141 ppb (no report of the O3 level in original residence) | Biomarker exposure | Increased TBARS in serum after the first week of the stay, normalized in samples obtained 16 weeks after | |
| MDA (FD) | Asthmatics (107) followed for 2–16 weeks (average 8 weeks) | MF | PM2.5, 27.4 (4.2–89.5) μg/m3 | Biomarker exposure | Positive association between ambient PM2.5 levels and MDA in EBC | |
| 8-oxodG (HPLC-ECD) | Students living in Copenhagen, Denmark (50) followed for 1 year | MF | Personal PM2.5, 16.1 (10–24.5) μg/m3 | No | Correlation between personal exposure to PM2.5 and 8-oxodG in WBCs and MDA in plasma (only women); no correlation between PM2.5 and FPG sites in WBCs or 24-hr urinary excretion of 8-oxodG; no correlation between biomarkers and stationary (urban background) measurements of PM2.5 | |
| 8-oxodG (ELISA) | Security guards analyzed before and after a work shift (2) followed for 2 months | NR | PM2.5, 243 (199–460) μg/m3 | Biomarker | Increased in urine after the work shift |
Abbreviations: ECD, electrochemical detection; ELISA, enzyme-linked immunosorbent assay; FD, fluorescence detection; M, male; MF, male and female; NR, not reported; NS, nonsmoker; SO2, sulfur dioxide; SPM, spectrophotometry.
The values represent exposure assessment in the high-exposure and low-exposure group, respectively, unless stated otherwise by specific footnotes.
We calculated means and SD from the regression analysis in the study, based on 10-μg/m3 increase in PM10 and a coefficient of variation of 100%.
We calculated the mean level of LPO from TBARS and 8-isoprostanes, and the SD from the lower 95% CI assuming that it is similar to the 5th percentile and the coefficient of variation is the same in the exposed and reference group.
We calculated data from the regression model reported in the original publication. The data correspond to the difference in LPO products from the interquartile range in personal PM2.5 exposure. We calculated the SD from the coefficient of variation of data reported as 5th and 95th percentile, assuming that it is equivalent to 95% CI, and the mean level of LPO products from data of TBARS and 8-isoprostanes.
We calculated the mean level of LPO products from TBARS and CDs.
We calculated data (means) by regression analysis assuming that the SD is the same as the interquartile range.
We assumed that the SD and interquartile is the same value for the analysis of 8-oxodG and calculated the mean level of ENDOIII/FPG sites.
The study encompassed samples from two subjects analyzed on 29 working days.
Summary of cross-sectional studies on exposure to air pollution PM from combustion processes in humans in different occupations.
| Biomarker | Subjects ( | Sex, age, smoking | Exposure assessment | Potential measurement error | Findings | Study |
|---|---|---|---|---|---|---|
| 8-oxodG (HPLC-ECD) | Bus drivers (107) | MF | 1-HOP (urine) | Exposure | Bus drivers in the city center had higher levels of urinary 8-oxodG excretion than did bus drivers from the rural/suburban area; no clear differences between urinary excretions on working days and on days off observed; unaltered MDA in plasma between bus drivers in the city center and rural/suburban area | |
| Lipid hydroperoxides (SPM) | Traffic officers and controls (32) | M | None | Biomarker exposure | No difference between exposed and controls | |
| FPG sites (comet) | Airport personnel (41) and controls (31) | NR | Stationary sampling of PAHs | Exposure | Higher level in WBCs of exposed subjects | |
| 8-oxodG (ELISA) | Taxi drivers (95) and controls (75) | M | 1-HOP (urine) | Biomarker exposure | Highest level in urine of exposed subjects | |
| 8-oxodG (HPLC-ECD) | Taxi-motor drivers and rural controls (41) | M | Ambient (stationary) concentration of PAHs and benzene | Biomarker exposure | Highest level in WBCs of exposed subjects (high background level of 8-oxodG, 11.1 lesions/106 dG) | |
| 8-oxodG (ELISA) | Highway toll workers and controls (74) | F | Traffic intensity and urinary 1-HOP glucuronide excretion | Biomarker exposure | Highest level in urine of exposed subjects | |
| ENDOIII/FPG sites (comet) | Policemen from Prague, Czech Republic (65) | M | PM2.5 (stationary monitoring data, 33 ± 40 and 15 ± 9 μg/m3) | Exposure | Highest level in WBCs of exposed subjects; positive correlation between PAH exposure and DNA damage in samples collected in January | |
| FPG sites (comet) | Subjects exposed to traffic (44) and controls (27) | MF | None | Exposure | Statistically nonsignificant higher level in WBCs of exposed subjects | |
| 8-oxodG (ELISA) | Bus drivers (50) and controls (50) | M | PM2.5 and PM10 (stationary monitoring station) and PAHs (personal exposure) | Biomarker exposure | Highest levels in urine of exposed subjects | |
| 8-oxodG (LC-MS/MS) | Policemen, bus drivers, and controls (356) | M | Concentration of PAHs in personal PM2.5 samples | Biomarker exposure | Policemen in Kosice, Slovakia, had higher levels of 8-oxodG in WBCs than did controls; no effect in policemen from Prague; 8-oxodG levels were very high (i.e., 53.6 lesions/106 nucleotides, corresponding to 244 lesions/106 dG); significantly higher levels of M1dG in exposed subjects in Sofia |
Abbreviations: ECD, electrochemical detection; ELISA, enzyme-linked immunosorbent assay; F, female; LC-MS, liquid chromatography–mass spectrometry; LC-MS/MS, liquid chromatography with tandem mass spectrometry; M, male; MF, male and female; NR, not reported; NS, nonsmoker; S, smoker; SPM, spectrophotometry.
The values represent exposure assessment in the high-exposure and low-exposure group, respectively, unless stated otherwise by specific footnotes.
We used data from bus drivers on working days.
We pooled means and SD from smokers and nonsmokers of controls and traffic officers at the sampling before the intervention with phytochemicals (day 0).
The publication reports the mean level DNA damage without indication of the SD, whereas later studies by the same group showed a coefficient of variation of 40%.
The data represent the variation between sampling in January and September. The personal exposure to PAHs in the exposed and control group was 6.0 and 4.5 ng/m3, respectively.
The study had sampling of PM2.5 and PM10 by personal monitors, but the low amount of material precluded the assessment of individual exposure.
Figure 2Forest plot of air pollution exposure on biomarkers of oxidized DNA, nucleobases, and lipids. Specific biomarkers in studies that have measured multiple assays of oxidized DNA and lipids are (1) 8-oxodG, (2) M1dG, (3) 8-oxodG, (4) ENDOIII/FPG sites, (5) ENDOIII/FPG sites, (6) 8-oxodG, (7) 8-oxodG, and (8) 8-oxoGua (the numbers in parentheses refer to references citations that are listed by first author/year only).