Literature DB >> 20404480

Cohesins coordinate gene transcriptions of related function within Saccharomyces cerevisiae.

Robert V Skibbens1, Jutta Marzillier, Laura Eastman.   

Abstract

Cohesion factors pair together sister chromatids from early S-phase until anaphase onset. Numerous findings also establish an additional role in transcription. In humans, mutations in cohesion factors result in developmental abnormalities such as Cornelia de Lange, Roberts Syndrome/SC-Phocomelia, Rothman-Thompson Syndrome and others. While clinically relevant, a detailed study that links experimentally-defined cohesin defects to transcriptional changes remains lacking. Here, we report on the effects of cohesin inactivation during an early and discrete portion of the cell cycle. Even transient cohesin inactivation during the G1 portion of the cell cycle results in significant and reproducible changes in transcription. Surprisingly, over a third of the affected genes exhibit inter-related functions, suggesting that cohesin positioning along chromosomes evolved to coordinate gene expression. Prior studies indicate that defects in rRNA maturation/ribosome biogenesis produce developmental maladies in humans. Thus, the identification of genes critical for rRNA maturation in this study is of particular interest.

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Year:  2010        PMID: 20404480      PMCID: PMC3096706          DOI: 10.4161/cc.9.8.11307

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  59 in total

1.  Cleavage of cohesin by the CD clan protease separin triggers anaphase in yeast.

Authors:  F Uhlmann; D Wernic; M A Poupart; E V Koonin; K Nasmyth
Journal:  Cell       Date:  2000-10-27       Impact factor: 41.582

2.  Cohesins localize with CTCF at the KSHV latency control region and at cellular c-myc and H19/Igf2 insulators.

Authors:  William Stedman; Hyojeung Kang; Shu Lin; Joseph L Kissil; Marisa S Bartolomei; Paul M Lieberman
Journal:  EMBO J       Date:  2008-01-24       Impact factor: 11.598

3.  Role of chromosome segregation genes in BRCA1-dependent lethality.

Authors:  Robert V Skibbens; Christina Sie; Laura Eastman
Journal:  Cell Cycle       Date:  2008-07-01       Impact factor: 4.534

Review 4.  Cell biology of cancer: BRCA1 and sister chromatid pairing reactions?

Authors:  Robert V Skibbens
Journal:  Cell Cycle       Date:  2007-12-13       Impact factor: 4.534

5.  Acetylation of Smc3 by Eco1 is required for S phase sister chromatid cohesion in both human and yeast.

Authors:  Jinglan Zhang; Xiaomin Shi; Yehua Li; Beom-Jun Kim; Junling Jia; Zhiwei Huang; Tao Yang; Xiaoyong Fu; Sung Yun Jung; Yi Wang; Pumin Zhang; Seong-Tae Kim; Xuewen Pan; Jun Qin
Journal:  Mol Cell       Date:  2008-07-11       Impact factor: 17.970

6.  The kleisin subunit of cohesin dictates damage-induced cohesion.

Authors:  Jill M Heidinger-Pauli; Elçin Unal; Vincent Guacci; Douglas Koshland
Journal:  Mol Cell       Date:  2008-07-11       Impact factor: 17.970

7.  The molecular mechanism underlying Roberts syndrome involves loss of ESCO2 acetyltransferase activity.

Authors:  Miriam Gordillo; Hugo Vega; Alison H Trainer; Fajian Hou; Norio Sakai; Ricardo Luque; Hülya Kayserili; Seher Basaran; Flemming Skovby; Raoul C M Hennekam; Maria L Giovannucci Uzielli; Rhonda E Schnur; Sylvie Manouvrier; Susan Chang; Edward Blair; Jane A Hurst; Francesca Forzano; Moritz Meins; Kalle O J Simola; Annick Raas-Rothschild; Roger A Schultz; Lisa D McDaniel; Keiichi Ozono; Koji Inui; Hui Zou; Ethylin Wang Jabs
Journal:  Hum Mol Genet       Date:  2008-04-14       Impact factor: 6.150

8.  Eco1-dependent cohesin acetylation during establishment of sister chromatid cohesion.

Authors:  Tom Rolef Ben-Shahar; Sebastian Heeger; Chris Lehane; Philip East; Helen Flynn; Mark Skehel; Frank Uhlmann
Journal:  Science       Date:  2008-07-25       Impact factor: 47.728

9.  A molecular determinant for the establishment of sister chromatid cohesion.

Authors:  Elçin Unal; Jill M Heidinger-Pauli; Woong Kim; Vincent Guacci; Itay Onn; Steven P Gygi; Douglas E Koshland
Journal:  Science       Date:  2008-07-25       Impact factor: 47.728

10.  CTCF physically links cohesin to chromatin.

Authors:  Eric D Rubio; David J Reiss; Piri L Welcsh; Christine M Disteche; Galina N Filippova; Nitin S Baliga; Ruedi Aebersold; Jeffrey A Ranish; Anton Krumm
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-11       Impact factor: 11.205

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  15 in total

1.  Cohesin plays a dual role in gene regulation and sister-chromatid cohesion during meiosis in Saccharomyces cerevisiae.

Authors:  Weiqiang Lin; Mian Wang; Hui Jin; Hong-Guo Yu
Journal:  Genetics       Date:  2011-01-26       Impact factor: 4.562

2.  Role for cohesin in the formation of a heterochromatic domain at fission yeast subtelomeres.

Authors:  Sonia Dheur; Sven J Saupe; Sylvie Genier; Stéphanie Vazquez; Jean-Paul Javerzat
Journal:  Mol Cell Biol       Date:  2010-12-28       Impact factor: 4.272

3.  A SIR-independent role for cohesin in subtelomeric silencing and organization.

Authors:  Deepash Kothiwal; Shikha Laloraya
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-06       Impact factor: 11.205

Review 4.  Cohesin codes - interpreting chromatin architecture and the many facets of cohesin function.

Authors:  Soumya Rudra; Robert V Skibbens
Journal:  J Cell Sci       Date:  2013-01-01       Impact factor: 5.285

Review 5.  Cohesin subunit RAD21: From biology to disease.

Authors:  Haizi Cheng; Nenggang Zhang; Debananda Pati
Journal:  Gene       Date:  2020-07-17       Impact factor: 3.688

6.  Cohesin dysfunction results in cell wall defects in budding yeast.

Authors:  Deepash Kothiwal; Swagathnath Gopinath; Shikha Laloraya
Journal:  Genetics       Date:  2021-03-03       Impact factor: 4.562

Review 7.  The ancient and evolving roles of cohesin in gene expression and DNA repair.

Authors:  Dale Dorsett; Lena Ström
Journal:  Curr Biol       Date:  2012-04-10       Impact factor: 10.834

8.  Cohesin-independent segregation of sister chromatids in budding yeast.

Authors:  Vincent Guacci; Douglas Koshland
Journal:  Mol Biol Cell       Date:  2011-12-21       Impact factor: 4.138

9.  Cohesin proteins promote ribosomal RNA production and protein translation in yeast and human cells.

Authors:  Tania Bose; Kenneth K Lee; Shuai Lu; Baoshan Xu; Bethany Harris; Brian Slaughter; Jay Unruh; Alexander Garrett; William McDowell; Andrew Box; Hua Li; Allison Peak; Sree Ramachandran; Chris Seidel; Jennifer L Gerton
Journal:  PLoS Genet       Date:  2012-06-14       Impact factor: 5.917

10.  Inactivation of the budding yeast cohesin loader Scc2 alters gene expression both globally and in response to a single DNA double strand break.

Authors:  Emma Lindgren; Sara Hägg; Fosco Giordano; Johan Björkegren; Lena Ström
Journal:  Cell Cycle       Date:  2014       Impact factor: 4.534

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