Literature DB >> 20403751

The complete mitogenome of the hydrothermal vent crab Xenograpsus testudinatus (Decapoda, Brachyura) and comparison with brachyuran crabs.

Jang-Seu Ki1, Hans-Uwe Dahms, Jiang-Shiou Hwang, Jae-Seong Lee.   

Abstract

In this study, we analyzed the complete mitochondrial (mt) genome of a hydrothermal vent crab Xenograpsus testudinatus (Decapoda: Brachyura) obtained from the hydrothermal vents off Kueishantao Island, Taiwan, which extend from the deep sea Okinawa Trench. The mitogenome of X. testudinatus was 15,796 bp in length and contained the same 37 genes (e.g. 2 rRNAs, 22 tRNAs, and 13 PCGs) found in other metazoan mitogenomes. Analysis of the structural mt gene order in X. testudinatus revealed that the 13 PCGs, excluding a translocation of ND6-Cyt b cluster, were similarly ordered when compared to the pancrustacean ground pattern; however the tRNAs were severely rearranged. Phylogenetic analysis of decapod mitogenomes showed that the molecular taxonomy of the vent crab was in accordance with its morphological systematics. Together, these findings suggest that the vent crab studied here has little mitochondrial genetic variation when compared with morphologically defined conspecifics from other marine habitats.

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Year:  2009        PMID: 20403751     DOI: 10.1016/j.cbd.2009.07.002

Source DB:  PubMed          Journal:  Comp Biochem Physiol Part D Genomics Proteomics        ISSN: 1744-117X            Impact factor:   2.674


  13 in total

1.  The mitochondrial genomes of Euphausia pacifica and Thysanoessa raschii sequenced using 454 next-generation sequencing, with a phylogenetic analysis of their position in the Malacostracan family tree.

Authors:  Mattias L Johansson; Angela L Sremba; Leah R Feinberg; Michael A Banks; William T Peterson
Journal:  Mol Biol Rep       Date:  2012-06-26       Impact factor: 2.316

2.  The Entire Mitochondrial Genome of Macrophthalmus abbreviatus Reveals Insights into the Phylogeny and Gene Rearrangements of Brachyura.

Authors:  Xinyi Xu; Qi Wang; Qiong Wu; Jiayan Xu; Jie Wang; Zhengfei Wang
Journal:  Biochem Genet       Date:  2021-01-07       Impact factor: 1.890

3.  The complete mitochondrial genome of the black mud crab, Scylla serrata (Crustacea: Brachyura: Portunidae) and its phylogenetic position among (pan)crustaceans.

Authors:  Amnuay Jondeung; Wirangrong Karinthanyakit; Jitlada Kaewkhumsan
Journal:  Mol Biol Rep       Date:  2012-10-11       Impact factor: 2.316

4.  Strong Ion Regulatory Abilities Enable the Crab Xenograpsus testudinatus to Inhabit Highly Acidified Marine Vent Systems.

Authors:  Marian Y Hu; Ying-Jey Guh; Yi-Ta Shao; Pou-Long Kuan; Guan-Lin Chen; Jay-Ron Lee; Ming-Shiou Jeng; Yung-Che Tseng
Journal:  Front Physiol       Date:  2016-02-01       Impact factor: 4.566

5.  The highly rearranged mitochondrial genomes of the crabs Maja crispata and Maja squinado (Majidae) and gene order evolution in Brachyura.

Authors:  Andrea Basso; Massimiliano Babbucci; Marianna Pauletto; Emilio Riginella; Tomaso Patarnello; Enrico Negrisolo
Journal:  Sci Rep       Date:  2017-06-22       Impact factor: 4.379

6.  Complete mitochondrial genome of Clistocoeloma sinensis (Brachyura: Grapsoidea): Gene rearrangements and higher-level phylogeny of the Brachyura.

Authors:  Zhao-Zhe Xin; Yu Liu; Dai-Zhen Zhang; Xin-Yue Chai; Zheng-Fei Wang; Hua-Bin Zhang; Chun-Lin Zhou; Bo-Ping Tang; Qiu-Ning Liu
Journal:  Sci Rep       Date:  2017-06-23       Impact factor: 4.379

7.  The complete mitochondrial genome of Sesarmops sinensis reveals gene rearrangements and phylogenetic relationships in Brachyura.

Authors:  Bo-Ping Tang; Zhao-Zhe Xin; Yu Liu; Dai-Zhen Zhang; Zheng-Fei Wang; Hua-Bin Zhang; Xin-Yue Chai; Chun-Lin Zhou; Qiu-Ning Liu
Journal:  PLoS One       Date:  2017-06-16       Impact factor: 3.240

8.  The complete mitochondrial genome of Somanniathelphusa boyangensis and phylogenetic analysis of Genus Somanniathelphusa (Crustacea: Decapoda: Parathelphusidae).

Authors:  Xin-Nan Jia; Shu-Xin Xu; Jun Bai; Yi-Fan Wang; Zong-Heng Nie; Chun-Chao Zhu; Yan Wang; Yi-Xiong Cai; Jie-Xin Zou; Xian-Min Zhou
Journal:  PLoS One       Date:  2018-02-13       Impact factor: 3.240

9.  Evolution and phylogeny of the mud shrimps (Crustacea: Decapoda) revealed from complete mitochondrial genomes.

Authors:  Feng-Jiau Lin; Yuan Liu; Zhongli Sha; Ling Ming Tsang; Ka Hou Chu; Tin-Yam Chan; Ruiyu Liu; Zhaoxia Cui
Journal:  BMC Genomics       Date:  2012-11-16       Impact factor: 3.969

10.  Are vent crab behavioral preferences adaptations for habitat choice?

Authors:  Hans-Uwe Dahms; Li-Chun Tseng; Jiang-Shiou Hwang
Journal:  PLoS One       Date:  2017-09-07       Impact factor: 3.240

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