Literature DB >> 20403742

Horse carboxylesterases: evidence for six CES1 and four families of CES genes on chromosome 3.

Roger S Holmes1, Laura A Cox, John L Vandeberg.   

Abstract

Carboxylesterases (CES) are responsible for the detoxification of a wide range of drugs and xenobiotics, and may contribute to cholesterol, fatty acid and lung surfactant metabolism. In this study, in silico methods were used to predict the amino acid sequences, secondary and tertiary structures, and gene locations for horse CES genes and encoded proteins, using data from the recently completed horse genome project. Evidence was obtained for six CES1 genes closely localised on horse chromosome 3, for which the predicted CES1 gene products are > or =74% identical. The horse genome also showed evidence for three other CES gene classes: CES5, located in tandem with the CES1 gene cluster; and CES2 and CES3, located more than 9 million base pairs downstream on chromosome 3. Horse CES2, CES3 and CES5 gene products shared 42-46% identity with each other, and with the CES1 protein subunits. Sequence alignments of these enzymes demonstrated key enzyme and family specific CES protein sequences reported for human CES1, CES2, CES3 and CES5. In addition, predicted secondary and tertiary structures for horse CES1, CES2, CES3 and CES5 subunits showed extensive conservation with human CES1. Phylogenetic analyses demonstrated the relationships and potential evolutionary origins of the horse CES sequences with previously reported sequences for human and other mammalian CES gene products. Several CES1 gene duplication events have apparently occurred following the appearance of the 'dawn' horse approximately 55 million years ago.

Entities:  

Year:  2008        PMID: 20403742      PMCID: PMC2916739          DOI: 10.1016/j.cbd.2008.10.004

Source DB:  PubMed          Journal:  Comp Biochem Physiol Part D Genomics Proteomics        ISSN: 1744-117X            Impact factor:   2.674


  58 in total

1.  The PSIPRED protein structure prediction server.

Authors:  L J McGuffin; K Bryson; D T Jones
Journal:  Bioinformatics       Date:  2000-04       Impact factor: 6.937

2.  Carboxylesterases (EC 3.1.1). Purification and titration of chicken, sheep, and horse liver carboxylesterases.

Authors:  P A Inkerman; K Scott; M T Runnegar; S E Hamilton; E A Bennett; B Zerner
Journal:  Can J Biochem       Date:  1975-05

3.  Molecular cloning and characterization of a novel carboxylesterase-like protein that is physiologically present at high concentrations in the urine of domestic cats (Felis catus).

Authors:  Masao Miyazaki; Katsuyoshi Kamiie; Satoshi Soeta; Hideharu Taira; Tetsuro Yamashita
Journal:  Biochem J       Date:  2003-02-15       Impact factor: 3.857

4.  Structural insights into drug processing by human carboxylesterase 1: tamoxifen, mevastatin, and inhibition by benzil.

Authors:  Christopher D Fleming; Sompop Bencharit; Carol C Edwards; Janice L Hyatt; Lyudmila Tsurkan; Feng Bai; Charles Fraga; Christopher L Morton; Escher L Howard-Williams; Philip M Potter; Matthew R Redinbo
Journal:  J Mol Biol       Date:  2005-09-09       Impact factor: 5.469

5.  Liver carboxylesterase cleaves surfactant protein (SP-) B and promotes surfactant subtype conversion.

Authors:  Clemens Ruppert; Ariane Bagheri; Philipp Markart; Reinhold Schmidt; Werner Seeger; Andreas Günther
Journal:  Biochem Biophys Res Commun       Date:  2006-08-10       Impact factor: 3.575

Review 6.  Possible physiological roles of carboxylic ester hydrolases.

Authors:  F J Leinweber
Journal:  Drug Metab Rev       Date:  1987       Impact factor: 4.518

7.  Carboxylesterases (EC 3.1.1). A comparison of some kinetic properties of horse, sheep, chicken, pig, and ox liver carboxylesterases.

Authors:  J K Stoops; S E Hamilton; B Zerner
Journal:  Can J Biochem       Date:  1975-05

8.  Baboon carboxylesterases 1 and 2: sequences, structures and phylogenetic relationships with human and other primate carboxylesterases.

Authors:  Roger S Holmes; Jeremy P Glenn; John L VandeBerg; Laura A Cox
Journal:  J Med Primatol       Date:  2009-02       Impact factor: 0.667

9.  Proteomic and lipid characterization of apolipoprotein B-free luminal lipid droplets from mouse liver microsomes: implications for very low density lipoprotein assembly.

Authors:  Huajin Wang; Dean Gilham; Richard Lehner
Journal:  J Biol Chem       Date:  2007-09-11       Impact factor: 5.157

10.  AceView: a comprehensive cDNA-supported gene and transcripts annotation.

Authors:  Danielle Thierry-Mieg; Jean Thierry-Mieg
Journal:  Genome Biol       Date:  2006-08-07       Impact factor: 13.583

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  2 in total

1.  Mammalian carboxylesterase 3: comparative genomics and proteomics.

Authors:  Roger S Holmes; Laura A Cox; John L VandeBerg
Journal:  Genetica       Date:  2010-04-28       Impact factor: 1.082

2.  Recommended nomenclature for five mammalian carboxylesterase gene families: human, mouse, and rat genes and proteins.

Authors:  Roger S Holmes; Matthew W Wright; Stanley J F Laulederkind; Laura A Cox; Masakiyo Hosokawa; Teruko Imai; Shun Ishibashi; Richard Lehner; Masao Miyazaki; Everett J Perkins; Phillip M Potter; Matthew R Redinbo; Jacques Robert; Tetsuo Satoh; Tetsuro Yamashita; Bingfan Yan; Tsuyoshi Yokoi; Rudolf Zechner; Lois J Maltais
Journal:  Mamm Genome       Date:  2010-10-08       Impact factor: 2.957

  2 in total

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