Literature DB >> 20401683

Positive selection drives lactoferrin evolution in mammals.

Guo Ming Liang1, Xun Ping Jiang.   

Abstract

Lactoferrin (LF) is a member of the transferrin family that is abundantly expressed and secreted by glandular epithelial cells. The biological functions of LF involve in iron homeostasis regulation of the body and antibacterial activity. Previous studies demonstrated that it had a high cationic N-terminal domain that could interact with glycosaminoglycans, lipopolysaccharides and the bacterial virulence protein. Two anti-microbial peptides, lactoferricin (LFcin) and lactoferrampin (LFampin), were also isolated and identified in N-terminal of LF. Although the antibacterial mechanism was carefully studied, little was known about the molecular evolution of LF. In this study, we estimated the nonsynonymous-to-synonymous substitution ratios ( ) per site using maximum likelihood method to analyze the LF evolution. The results of omega > 1 and five identified positive selection sites of amino acid suggested that the evolution of LF gene was characterized by positive selection. Further study found that the positive selection sites were either located in the LF-bacteria binding region or the peptides of LFcin and LFampin, indicating that the selection pressure was related to LF-bacteria interaction. The identification of these sites may contribute to the mechanism of bacteria-LF interaction.

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Year:  2010        PMID: 20401683     DOI: 10.1007/s10709-010-9456-x

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  30 in total

1.  Molecular evolution of transferrin: evidence for positive selection in salmonids.

Authors:  M J Ford
Journal:  Mol Biol Evol       Date:  2001-04       Impact factor: 16.240

2.  Codon-substitution models for heterogeneous selection pressure at amino acid sites.

Authors:  Z Yang; R Nielsen; N Goldman; A M Pedersen
Journal:  Genetics       Date:  2000-05       Impact factor: 4.562

3.  Structure of buffalo lactoferrin at 2.5 A resolution using crystals grown at 303 K shows different orientations of the N and C lobes.

Authors:  S Karthikeyan; M Paramasivam; S Yadav; A Srinivasan; T P Singh
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-11

Review 4.  Lactoferrin: structure, function and applications.

Authors:  Susana A González-Chávez; Sigifredo Arévalo-Gallegos; Quintín Rascón-Cruz
Journal:  Int J Antimicrob Agents       Date:  2008-10-07       Impact factor: 5.283

5.  Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene.

Authors:  R Nielsen; Z Yang
Journal:  Genetics       Date:  1998-03       Impact factor: 4.562

6.  Three-dimensional structure of mare diferric lactoferrin at 2.6 A resolution.

Authors:  A K Sharma; M Paramasivam; A Srinivasan; M P Yadav; T P Singh
Journal:  J Mol Biol       Date:  1999-06-04       Impact factor: 5.469

7.  Camel lactoferrin, a transferrin-cum-lactoferrin: crystal structure of camel apolactoferrin at 2.6 A resolution and structural basis of its dual role.

Authors:  J A Khan; P Kumar; M Paramasivam; R S Yadav; M S Sahani; S Sharma; A Srinivasan; T P Singh
Journal:  J Mol Biol       Date:  2001-06-08       Impact factor: 5.469

8.  Metal substitution in transferrins: specific binding of cerium(IV) revealed by the crystal structure of cerium-substituted human lactoferrin.

Authors:  H M Baker; C J Baker; C A Smith; E N Baker
Journal:  J Biol Inorg Chem       Date:  2000-12       Impact factor: 3.358

9.  Bactericidal activity of LFchimera is stronger and less sensitive to ionic strength than its constituent lactoferricin and lactoferrampin peptides.

Authors:  Jan G M Bolscher; Regina Adão; Kamran Nazmi; Petra A M van den Keybus; Wim van 't Hof; Arie V Nieuw Amerongen; Margarida Bastos; Enno C I Veerman
Journal:  Biochimie       Date:  2008-06-05       Impact factor: 4.079

10.  Positive selection on multiple antique allelic lineages of transferrin in the polyploid Carassius auratus.

Authors:  Lin Yang; Jian-Fang Gui
Journal:  Mol Biol Evol       Date:  2004-03-10       Impact factor: 16.240

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  7 in total

1.  Lipid-binding surfaces of membrane proteins: evidence from evolutionary and structural analysis.

Authors:  Larisa Adamian; Hammad Naveed; Jie Liang
Journal:  Biochim Biophys Acta       Date:  2010-12-16

2.  "Phylogenetic and evolutionary analysis of functional divergence among Gamma glutamyl transpeptidase (GGT) subfamilies".

Authors:  Ved Vrat Verma; Rani Gupta; Manisha Goel
Journal:  Biol Direct       Date:  2015-09-14       Impact factor: 4.540

3.  PFR peptide, one of the antimicrobial peptides identified from the derivatives of lactoferrin, induces necrosis in leukemia cells.

Authors:  Yan Lu; Teng-Fei Zhang; Yue Shi; Han-Wei Zhou; Qi Chen; Bu-Yun Wei; Xi Wang; Tian-Xin Yang; Y Eugene Chinn; Jian Kang; Cai-Yun Fu
Journal:  Sci Rep       Date:  2016-02-10       Impact factor: 4.379

4.  Lactoferrin binding protein B - a bi-functional bacterial receptor protein.

Authors:  Nicholas K H Ostan; Rong-Hua Yu; Dixon Ng; Christine Chieh-Lin Lai; Anastassia K Pogoutse; Vladimir Sarpe; Morgan Hepburn; Joey Sheff; Shaunak Raval; David C Schriemer; Trevor F Moraes; Anthony B Schryvers
Journal:  PLoS Pathog       Date:  2017-03-03       Impact factor: 6.823

5.  An Ancient Mutation in the TPH1 Gene is Consistent with the Changes in Mammalian Reproductive Rhythm.

Authors:  Chenhui Liu; Xunping Jiang; Guiqiong Liu; Teketay Wassie; Shishay Girmay
Journal:  Int J Mol Sci       Date:  2019-12-02       Impact factor: 5.923

6.  Phylogenetic analyses uncover a novel clade of transferrin in nonmammalian vertebrates.

Authors:  Hirzahida Mohd-Padil; Adura Mohd-Adnan; Toni Gabaldón
Journal:  Mol Biol Evol       Date:  2012-12-19       Impact factor: 16.240

7.  Antimicrobial Functions of Lactoferrin Promote Genetic Conflicts in Ancient Primates and Modern Humans.

Authors:  Matthew F Barber; Zev Kronenberg; Mark Yandell; Nels C Elde
Journal:  PLoS Genet       Date:  2016-05-20       Impact factor: 5.917

  7 in total

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