Literature DB >> 20400546

A unique group of virus-related, genome-integrating elements found solely in the bacterial family Thermaceae and the archaeal family Halobacteriaceae.

Matti Jalasvuori1, Alice Pawlowski, Jaana K H Bamford.   

Abstract

Viruses SH1 and P23-77, infecting archaeal Haloarcula species and bacterial Thermus species, respectively, were recently designated to form a novel viral lineage. In this study, the lineage is expanded to archaeal Halomicrobium and bacterial Meiothermus species by analysis of five genome-integrated elements that share the core genes with these viruses.

Entities:  

Mesh：

Year:  2010        PMID： 20400546      PMCID： PMC2901701          DOI： 10.1128/JB.00124-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  26 in total

1.  The ORFanage: an ORFan database.

Authors:  Naomi Siew; Yaniv Azaria; Daniel Fischer
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

Review 2.  The impact of prophages on bacterial chromosomes.

Authors:  Carlos Canchaya; Ghislain Fournous; Harald Brüssow
Journal:  Mol Microbiol       Date:  2004-07       Impact factor: 3.501

3.  Does common architecture reveal a viral lineage spanning all three domains of life?

Authors:  Stacy D Benson; Jaana K H Bamford; Dennis H Bamford; Roger M Burnett
Journal:  Mol Cell       Date:  2004-12-03       Impact factor: 17.970

4.  Insights into assembly from structural analysis of bacteriophage PRD1.

Authors:  Nicola G A Abrescia; Joseph J B Cockburn; Jonathan M Grimes; Geoffrey C Sutton; Jonathan M Diprose; Sarah J Butcher; Stephen D Fuller; Carmen San Martín; Roger M Burnett; David I Stuart; Dennis H Bamford; Jaana K H Bamford
Journal:  Nature       Date:  2004-11-04       Impact factor: 49.962

5.  Do viruses form lineages across different domains of life?

Authors:  Dennis H Bamford
Journal:  Res Microbiol       Date:  2003-05       Impact factor: 3.992

6.  The genomic structure of thermus bacteriophage {phi}IN93.

Authors:  Isao Matsushita; Hideshi Yanase
Journal:  J Biochem       Date:  2009-08-12       Impact factor: 3.387

7.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

8.  Phylogenetic test of the molecular clock and linearized trees.

Authors:  N Takezaki; A Rzhetsky; M Nei
Journal:  Mol Biol Evol       Date:  1995-09       Impact factor: 16.240

9.  Haloarcula argentinensis sp. nov. and Haloarcula mukohataei sp. nov., two new extremely halophilic archaea collected in Argentina.

Authors:  K Ihara; S Watanabe; T Tamura
Journal:  Int J Syst Bacteriol       Date:  1997-01

10.  Halomicrobium mukohataei gen. nov., comb. nov., and emended description of Halomicrobium mukohataei.

Authors:  Aharon Oren; Rahel Elevi; Satoshi Watanabe; Kunio Ihara; Angela Corcelli
Journal:  Int J Syst Evol Microbiol       Date:  2002-09       Impact factor: 2.747
View more
  12 in total

1.  The Minor Capsid Protein VP11 of Thermophilic Bacteriophage P23-77 Facilitates Virus Assembly by Using Lipid-Protein Interactions.

Authors:  Alice Pawlowski; Anni M Moilanen; Ilona A Rissanen; Juha A E Määttä; Vesa P Hytönen; Janne A Ihalainen; Jaana K H Bamford
Journal:  J Virol       Date:  2015-05-13       Impact factor: 5.103

Review 2.  Genomics of bacterial and archaeal viruses: dynamics within the prokaryotic virosphere.

Authors:  Mart Krupovic; David Prangishvili; Roger W Hendrix; Dennis H Bamford
Journal:  Microbiol Mol Biol Rev       Date:  2011-12       Impact factor: 11.056

Review 3.  Biogeography and taxonomic overview of terrestrial hot spring thermophilic phages.

Authors:  Olivier Zablocki; Leonardo van Zyl; Marla Trindade
Journal:  Extremophiles       Date:  2018-08-18       Impact factor: 2.395

4.  Classification of prokaryotic genetic replicators: between selfishness and altruism.

Authors:  Matti Jalasvuori; Eugene V Koonin
Journal:  Ann N Y Acad Sci       Date:  2015-02-19       Impact factor: 5.691

5.  Closely related archaeal Haloarcula hispanica icosahedral viruses HHIV-2 and SH1 have nonhomologous genes encoding host recognition functions.

Authors:  Salla T Jaakkola; Reetta K Penttinen; Silja T Vilén; Matti Jalasvuori; Gunilla Rönnholm; Jaana K H Bamford; Dennis H Bamford; Hanna M Oksanen
Journal:  J Virol       Date:  2012-02-22       Impact factor: 5.103

6.  Microviridae goes temperate: microvirus-related proviruses reside in the genomes of Bacteroidetes.

Authors:  Mart Krupovic; Patrick Forterre
Journal:  PLoS One       Date:  2011-05-10       Impact factor: 3.240

7.  Crystallization and preliminary crystallographic analysis of the major capsid proteins VP16 and VP17 of bacteriophage P23-77.

Authors:  Ilona Rissanen; Alice Pawlowski; Karl Harlos; Jonathan M Grimes; David I Stuart; Jaana K H Bamford
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-04-21

8.  Salinity regulation of the interaction of halovirus SNJ1 with its host and alteration of the halovirus replication strategy to adapt to the variable ecosystem.

Authors:  Yunjun Mei; Congcong He; Yongchi Huang; Ying Liu; Ziqian Zhang; Xiangdong Chen; Ping Shen
Journal:  PLoS One       Date:  2015-04-08       Impact factor: 3.240

9.  Vehicles, replicators, and intercellular movement of genetic information: evolutionary dissection of a bacterial cell.

Authors:  Matti Jalasvuori
Journal:  Int J Evol Biol       Date:  2012-04-10

10.  Bacteriophage P23-77 capsid protein structures reveal the archetype of an ancient branch from a major virus lineage.

Authors:  Ilona Rissanen; Jonathan M Grimes; Alice Pawlowski; Sari Mäntynen; Karl Harlos; Jaana K H Bamford; David I Stuart
Journal:  Structure       Date:  2013-04-25       Impact factor: 5.006
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.