Literature DB >> 20392630

Interactions of the ribosome with mRNA and tRNA.

Natalia Demeshkina1, Lasse Jenner, Gulnara Yusupova, Marat Yusupov.   

Abstract

Recent collection of high-resolution crystal structures of the 70S ribosome with mRNA and tRNA substrates enhances our knowledge of protein synthesis principles. A novel network of interactions between the ribosome in the elongation state and mRNA downstream from the A codon suggests that mRNA is stabilized and aligned at the entrance to the decoding center. The X-ray studies clarify how natural modifications of tRNA are involved in the stabilization of the codon-anticodon interactions, prevention of frame-shifting and also expansion of the decoding capacity of tRNAs. In addition, the crystal structures provide the view that tRNA in the A and P sites communicate through a protein rich environment and suggest how these tRNAs are controlled through the intersubunit bridge formed by protein L31. Crown Copyright 2010. Published by Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20392630     DOI: 10.1016/j.sbi.2010.03.002

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  21 in total

1.  Excited states of ribosome translocation revealed through integrative molecular modeling.

Authors:  Paul C Whitford; Aqeel Ahmed; Yanan Yu; Scott P Hennelly; Florence Tama; Christian M T Spahn; José N Onuchic; Karissa Y Sanbonmatsu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-11       Impact factor: 11.205

2.  Kinetics of tRNA folding monitored by aminoacylation.

Authors:  Hari Bhaskaran; Annia Rodriguez-Hernandez; John J Perona
Journal:  RNA       Date:  2012-01-27       Impact factor: 4.942

3.  RNase P: at last, the key finds its lock.

Authors:  Benoît Masquida; Eric Westhof
Journal:  RNA       Date:  2011-07-29       Impact factor: 4.942

Review 4.  Protein folding and tRNA biology.

Authors:  Mónica Marín; Tamara Fernández-Calero; Ricardo Ehrlich
Journal:  Biophys Rev       Date:  2017-09-24

5.  The human tRNA m (5) C methyltransferase Misu is multisite-specific.

Authors:  Sylvie Auxilien; Vincent Guérineau; Zofia Szweykowska-Kulińska; Béatrice Golinelli-Pimpaneau
Journal:  RNA Biol       Date:  2012-09-20       Impact factor: 4.652

Review 6.  The Conservation and Function of RNA Secondary Structure in Plants.

Authors:  Lee E Vandivier; Stephen J Anderson; Shawn W Foley; Brian D Gregory
Journal:  Annu Rev Plant Biol       Date:  2016-02-08       Impact factor: 26.379

7.  Structural determinants for geometry and information decoding of tRNA by T box leader RNA.

Authors:  Jason C Grigg; Ailong Ke
Journal:  Structure       Date:  2013-10-03       Impact factor: 5.006

8.  The kissing-loop T-shaped structure translational enhancer of Pea enation mosaic virus can bind simultaneously to ribosomes and a 5' proximal hairpin.

Authors:  Feng Gao; Suna P Gulay; Wojciech Kasprzak; Jonathan D Dinman; Bruce A Shapiro; Anne E Simon
Journal:  J Virol       Date:  2013-08-28       Impact factor: 5.103

Review 9.  Computational studies of molecular machines: the ribosome.

Authors:  Karissa Y Sanbonmatsu
Journal:  Curr Opin Struct Biol       Date:  2012-02-13       Impact factor: 6.809

10.  Adjacent Codons Act in Concert to Modulate Translation Efficiency in Yeast.

Authors:  Caitlin E Gamble; Christina E Brule; Kimberly M Dean; Stanley Fields; Elizabeth J Grayhack
Journal:  Cell       Date:  2016-06-30       Impact factor: 41.582

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.