Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Analyzing 'omics data using hierarchical models.

Literature DB >> 20379180

Analyzing 'omics data using hierarchical models.

Hongkai Ji¹, X Shirley Liu.

Abstract

Entities: Disease Gene

Mesh：

Year: 2010 PMID： 20379180 PMCID： PMC2904972 DOI： 10.1038/nbt.1619

Source DB: PubMed Journal: Nat Biotechnol ISSN： 1087-0156 Impact factor: 54.908

× No keyword cloud information.

6 in total

Review 1. The Bayesian revolution in genetics.

Authors: Mark A Beaumont; Bruce Rannala
Journal: Nat Rev Genet Date: 2004-04 Impact factor: 53.242

2. CisModule: de novo discovery of cis-regulatory modules by hierarchical mixture modeling.

Authors: Qing Zhou; Wing H Wong
Journal: Proc Natl Acad Sci U S A Date: 2004-08-05 Impact factor: 11.205

3. TileMap: create chromosomal map of tiling array hybridizations.

Authors: Hongkai Ji; Wing Hung Wong
Journal: Bioinformatics Date: 2005-07-26 Impact factor: 6.937

4. Linear models and empirical bayes methods for assessing differential expression in microarray experiments.

Authors: Gordon K Smyth
Journal: Stat Appl Genet Mol Biol Date: 2004-02-12

5. Enriching the analysis of genomewide association studies with hierarchical modeling.

Authors: Gary K Chen; John S Witte
Journal: Am J Hum Genet Date: 2007-06-26 Impact factor: 11.025

6. Intensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experiments.

Authors: Maureen A Sartor; Craig R Tomlinson; Scott C Wesselkamper; Siva Sivaganesan; George D Leikauf; Mario Medvedovic
Journal: BMC Bioinformatics Date: 2006-12-19 Impact factor: 3.169

6 in total

26 in total

1. ScreenBEAM: a novel meta-analysis algorithm for functional genomics screens via Bayesian hierarchical modeling.

Authors: Jiyang Yu; Jose Silva; Andrea Califano
Journal: Bioinformatics Date: 2015-09-28 Impact factor: 6.937

2. Bayesian inference with historical data-based informative priors improves detection of differentially expressed genes.

Authors: Ben Li; Zhaonan Sun; Qing He; Yu Zhu; Zhaohui S Qin
Journal: Bioinformatics Date: 2015-10-30 Impact factor: 6.937

3. Statistical analysis of multi-dimensional, temporal gene expression of stem cells to elucidate colony size-dependent neural differentiation.

Authors: Ramila Joshi; Brendan Fuller; Jun Li; Hossein Tavana
Journal: Mol Omics Date: 2018-04-16

Review 4. Analysing and interpreting DNA methylation data.

Authors: Christoph Bock
Journal: Nat Rev Genet Date: 2012-10 Impact factor: 53.242

5. Improving Hierarchical Models Using Historical Data with Applications in High-Throughput Genomics Data Analysis.

Authors: Ben Li; Yunxiao Li; Zhaohui S Qin
Journal: Stat Biosci Date: 2016-07-08

6. ROBUST HYPERPARAMETER ESTIMATION PROTECTS AGAINST HYPERVARIABLE GENES AND IMPROVES POWER TO DETECT DIFFERENTIAL EXPRESSION.

Authors: Belinda Phipson; Stanley Lee; Ian J Majewski; Warren S Alexander; Gordon K Smyth
Journal: Ann Appl Stat Date: 2016-07-22 Impact factor: 2.083

7. In silico method for modelling metabolism and gene product expression at genome scale.

Authors: Joshua A Lerman; Daniel R Hyduke; Haythem Latif; Vasiliy A Portnoy; Nathan E Lewis; Jeffrey D Orth; Alexandra C Schrimpe-Rutledge; Richard D Smith; Joshua N Adkins; Karsten Zengler; Bernhard O Palsson
Journal: Nat Commun Date: 2012-07-03 Impact factor: 14.919