Literature DB >> 20372186

Replication of the LINGO1 gene association with essential tremor in a North American population.

Lorraine N Clark1, Naeun Park, Sergey Kisselev, Eileen Rios, Joseph H Lee, Elan D Louis.   

Abstract

A marker in the LINGO1 gene, rs9652490, showing significant genome-wide association with essential tremor (ET), was recently reported in an Icelandic population. To replicate this association in an independent population from North America, we genotyped 15 SNPs in the LINGO1 gene in 257 Caucasian ET cases ('definite,' 'probable' or 'possible') and 265 controls enrolled in an epidemiological study at Columbia University. We observed a marginally significant association with allele G of the marker rs9652490 (P=0.0569, odds ratio (OR)=1.33). However, for 'definite' or 'probable' ET, rs9652490 was significantly associated with ET (P=0.03, OR=1.41). Our subsequent analysis of early-onset ET (age at onset <40 years) revealed that three SNPs, rs177008, rs13313467 and rs8028808, were significantly associated with ET (P=0.028, OR=1.52; P=0.0238, OR=1.54; and P=0.0391, OR=1.55, respectively). These three SNPs represent a 2.3 kb haplotype. Finally, a meta-analysis of three published studies confirms allelic association with rs9652490 and two adjacent SNPs. Our study independently confirms that the LINGO1 gene is a risk factor for ET in a Caucasian population in North America, and further shows that those with early-onset ET are likely to be at high risk.

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Year:  2010        PMID: 20372186      PMCID: PMC2987362          DOI: 10.1038/ejhg.2010.27

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  24 in total

1.  Test-retest reliability of patient information on age of onset in essential tremor.

Authors:  E D Louis; R B Schonberger; M Parides; B Ford; L F Barnes
Journal:  Mov Disord       Date:  2000-07       Impact factor: 10.338

2.  Score tests for association between traits and haplotypes when linkage phase is ambiguous.

Authors:  Daniel J Schaid; Charles M Rowland; David E Tines; Robert M Jacobson; Gregory A Poland
Journal:  Am J Hum Genet       Date:  2001-12-27       Impact factor: 11.025

3.  Haploview: analysis and visualization of LD and haplotype maps.

Authors:  J C Barrett; B Fry; J Maller; M J Daly
Journal:  Bioinformatics       Date:  2004-08-05       Impact factor: 6.937

Review 4.  Essential tremor: emerging views of a common disorder.

Authors:  Julián Benito-León; Elan D Louis
Journal:  Nat Clin Pract Neurol       Date:  2006-12

5.  The LRRK2 I2012T, G2019S and I2020T mutations are not common in patients with essential tremor.

Authors:  Hao Deng; WeiDong Le; Anthony L Davidson; WenJie Xie; Joseph Jankovic
Journal:  Neurosci Lett       Date:  2006-08-30       Impact factor: 3.046

6.  Mapping of a familial essential tremor gene, FET1, to chromosome 3q13.

Authors:  J R Gulcher; P Jónsson; A Kong; K Kristjánsson; M L Frigge; A Kárason; I E Einarsdóttir; H Stefánsson; A S Einarsdóttir; S Sigurthoardóttir; S Baldursson; S Björnsdóttir; S M Hrafnkelsdóttir; F Jakobsson; J Benedickz; K Stefánsson
Journal:  Nat Genet       Date:  1997-09       Impact factor: 38.330

7.  A gene (ETM) for essential tremor maps to chromosome 2p22-p25.

Authors:  J J Higgins; L T Pho; L E Nee
Journal:  Mov Disord       Date:  1997-11       Impact factor: 10.338

8.  Risk of action tremor in relatives of tremor-dominant and postural instability gait disorder PD.

Authors:  E D Louis; G Levy; H Mejia-Santana; L Cote; H Andrews; J Harris; C Waters; B Ford; S Frucht; S Fahn; R Ottman; K Marder
Journal:  Neurology       Date:  2003-10-14       Impact factor: 9.910

9.  LINGO1 rs9652490 is associated with essential tremor and Parkinson disease.

Authors:  Carles Vilariño-Güell; Owen A Ross; Christian Wider; Barbara Jasinska-Myga; Stephanie A Cobb; Alexandra I Soto-Ortolaza; Jennifer M Kachergus; Brett H Keeling; Justus C Dachsel; Heather L Melrose; Bahareh Behrouz; Zbigniew K Wszolek; Ryan J Uitti; Jan O Aasly; Alex Rajput; Matthew J Farrer
Journal:  Parkinsonism Relat Disord       Date:  2009-08-31       Impact factor: 4.891

10.  Genomewide scans in North American families reveal genetic linkage of essential tremor to a region on chromosome 6p23.

Authors:  Alexey Shatunov; Nyamkhishig Sambuughin; Joseph Jankovic; Rodger Elble; Hee Suk Lee; Andrew B Singleton; Ayush Dagvadorj; Jay Ji; Yiping Zhang; Virginia E Kimonis; John Hardy; Mark Hallett; Lev G Goldfarb
Journal:  Brain       Date:  2006-05-15       Impact factor: 13.501

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  30 in total

1.  Use of genome-wide association studies for drug repositioning.

Authors:  Philippe Sanseau; Pankaj Agarwal; Michael R Barnes; Tomi Pastinen; J Brent Richards; Lon R Cardon; Vincent Mooser
Journal:  Nat Biotechnol       Date:  2012-04-10       Impact factor: 54.908

2.  LINGO1 and essential tremor: linking the shakes. Linking LINGO1 to essential tremor.

Authors:  Eng-King Tan
Journal:  Eur J Hum Genet       Date:  2010-04-07       Impact factor: 4.246

3.  Lingo2 variants associated with essential tremor and Parkinson's disease.

Authors:  Yi-Wen Wu; K M Prakash; Tian-Yi Rong; Hui-Hua Li; Qin Xiao; Louis C Tan; Wing-Lok Au; Jian-qing Ding; Sheng-di Chen; Eng-King Tan
Journal:  Hum Genet       Date:  2011-02-02       Impact factor: 4.132

4.  Genetic analysis of the leucine-rich repeat and lg domain containing Nogo receptor-interacting protein 1 gene in essential tremor.

Authors:  Hui Liang; Zhi Song; Xiong Deng; Hongbo Xu; Anding Zhu; Wen Zheng; Yongxiang Zhao; Hao Deng
Journal:  J Mol Neurosci       Date:  2013-06-12       Impact factor: 3.444

5.  Purkinje cell axonal anatomy: quantifying morphometric changes in essential tremor versus control brains.

Authors:  Rachel Babij; Michelle Lee; Etty Cortés; Jean-Paul G Vonsattel; Phyllis L Faust; Elan D Louis
Journal:  Brain       Date:  2013-09-12       Impact factor: 13.501

6.  Essential tremor: is it a neurodegenerative disease? No.

Authors:  Monica M Kurtis
Journal:  J Neural Transm (Vienna)       Date:  2012-08-17       Impact factor: 3.575

Review 7.  Challenges in essential tremor genetics.

Authors:  L N Clark; E D Louis
Journal:  Rev Neurol (Paris)       Date:  2015-05-21       Impact factor: 2.607

8.  Lingo-1 expression is increased in essential tremor cerebellum and is present in the basket cell pinceau.

Authors:  Sheng-Han Kuo; Guomei Tang; Elan D Louis; Karen Ma; Rachel Babji; Matthew Balatbat; Etty Cortes; Jean-Paul G Vonsattel; Ai Yamamoto; David Sulzer; Phyllis L Faust
Journal:  Acta Neuropathol       Date:  2013-03-31       Impact factor: 17.088

Review 9.  Essential tremor.

Authors:  Lorraine N Clark; Elan D Louis
Journal:  Handb Clin Neurol       Date:  2018

Review 10.  From neurons to neuron neighborhoods: the rewiring of the cerebellar cortex in essential tremor.

Authors:  Elan D Louis
Journal:  Cerebellum       Date:  2014-08       Impact factor: 3.847

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