Literature DB >> 20353168

Probing soluble guanylate cyclase activation by CO and YC-1 using resonance Raman spectroscopy.

Mohammed Ibrahim1, Emily R Derbyshire, Michael A Marletta, Thomas G Spiro.   

Abstract

Soluble guanylate cyclase (sGC) is weakly activated by carbon monoxide (CO) but is significantly activated by the binding of YC-1 to the sGC-CO complex. In this report, resonance Raman (RR) spectroscopy was used to study selected sGC variants. Addition of YC-1 to the sGC-CO complex alters the intensity pattern of RR bands assigned to the vinyl and propionate heme substituents, suggesting changes in the tilting of the pyrrole rings to which they are attached. YC-1 also shifts the RR intensity of the nu(FeC) and nu(CO) bands from 473 and 1985 cm(-1) to 487 and 1969 cm(-1), respectively, and induces an additional nu(FeC) band, at 521 cm(-1), assigned to five-coordinate heme-CO. Site-directed variants in the proximal heme pocket (P118A) or in the distal heme pocket (V5Y and I149Y) reduce the extent of YC-1 activation, along with the 473 cm(-1) band intensity. These lower-activity sGC variants display another nu(FeC) band at 493 cm(-1) which is insensitive to YC-1 addition and is attributed to protein that cannot be activated by the allosteric activator. The results are consistent with a model in which YC-1 binding to the sGC-CO complex results in a conformational change that activates the protein. Specifically, YC-1 binding alters the heme geometry via peripheral nonbonded contacts and also relieves an intrinsic electronic effect that weakens FeCO backbonding in the native, YC-1 responsive protein. This electronic effect might involve neutralization of the heme propionates via H-bond contacts or negative polarization by a distal cysteine residue. YC-1 binding also strains the Fe-histidine bond, leading to a population of the five-coordinate sGC-CO complex in addition to a conformationally distinct population of the six-coordinate sGC-CO complex. The loss of YC-1 activation in the sGC variants might involve a weakening of the heme-protein contacts that are thought to be critical to a YC-1-induced conformational change.

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Year:  2010        PMID: 20353168      PMCID: PMC2894327          DOI: 10.1021/bi902214j

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  40 in total

1.  Inhibition of deactivation of NO-sensitive guanylyl cyclase accounts for the sensitizing effect of YC-1.

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2.  Crystal structure of an oxygen-binding heme domain related to soluble guanylate cyclases.

Authors:  Patricia Pellicena; David S Karow; Elizabeth M Boon; Michael A Marletta; John Kuriyan
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-23       Impact factor: 11.205

3.  Spectral and kinetic studies on the activation of soluble guanylate cyclase by nitric oxide.

Authors:  J R Stone; M A Marletta
Journal:  Biochemistry       Date:  1996-01-30       Impact factor: 3.162

4.  Binding of YC-1 or BAY 41-2272 to soluble guanylyl cyclase induces a geminate phase in CO photolysis.

Authors:  Xiaohui Hu; Changjian Feng; James T Hazzard; Gordon Tollin; William R Montfort
Journal:  J Am Chem Soc       Date:  2008-11-26       Impact factor: 15.419

5.  Activation of soluble guanylyl cyclase by four-coordinate metalloporphyrins: evidence for a role for porphyrin conformation.

Authors:  Heather S Carr; Dat Tran; Mark F Reynolds; Judith N Burstyn; Thomas G Spiro
Journal:  Biochemistry       Date:  2002-08-06       Impact factor: 3.162

Review 6.  NO-independent, haem-dependent soluble guanylate cyclase stimulators.

Authors:  Johannes-Peter Stasch; Adrian J Hobbs
Journal:  Handb Exp Pharmacol       Date:  2009

Review 7.  Biochemistry of soluble guanylate cyclase.

Authors:  Emily R Derbyshire; Michael A Marletta
Journal:  Handb Exp Pharmacol       Date:  2009

8.  Nucleotide regulation of soluble guanylate cyclase substrate specificity.

Authors:  Emily R Derbyshire; Nathaniel B Fernhoff; Sarah Deng; Michael A Marletta
Journal:  Biochemistry       Date:  2009-08-11       Impact factor: 3.162

Review 9.  Novel neural modulators.

Authors:  Darren Boehning; Solomon H Snyder
Journal:  Annu Rev Neurosci       Date:  2003       Impact factor: 12.449

Review 10.  Carbon monoxide and hypertension.

Authors:  Joseph F Ndisang; Hortense E Nsoh Tabien; Rui Wang
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  13 in total

1.  Soluble guanylate cyclase is activated differently by excess NO and by YC-1: resonance Raman spectroscopic evidence.

Authors:  Mohammed Ibrahim; Emily R Derbyshire; Alexandra V Soldatova; Michael A Marletta; Thomas G Spiro
Journal:  Biochemistry       Date:  2010-06-15       Impact factor: 3.162

2.  Probing domain interactions in soluble guanylate cyclase.

Authors:  Emily R Derbyshire; Michael B Winter; Mohammed Ibrahim; Sarah Deng; Thomas G Spiro; Michael A Marletta
Journal:  Biochemistry       Date:  2011-05-03       Impact factor: 3.162

3.  Probing the local electronic and geometric properties of the heme iron center in a H-NOX domain.

Authors:  Zhou Dai; Elizabeth M Boon
Journal:  J Inorg Biochem       Date:  2011-03-13       Impact factor: 4.155

4.  A novel insight into the heme and NO/CO binding mechanism of the alpha subunit of human soluble guanylate cyclase.

Authors:  Fangfang Zhong; Jie Pan; Xiaoxiao Liu; Hongyan Wang; Tianlei Ying; Jihu Su; Zhong-Xian Huang; Xiangshi Tan
Journal:  J Biol Inorg Chem       Date:  2011-07-02       Impact factor: 3.358

5.  Is histidine dissociation a critical component of the NO/H-NOX signaling mechanism? Insights from X-ray absorption spectroscopy.

Authors:  Zhou Dai; Erik R Farquhar; Dhruv P Arora; Elizabeth M Boon
Journal:  Dalton Trans       Date:  2012-03-20       Impact factor: 4.390

6.  The soluble guanylyl cyclase activator YC-1 increases intracellular cGMP and cAMP via independent mechanisms in INS-1E cells.

Authors:  Lavoisier S Ramos-Espiritu; Kenneth C Hess; Jochen Buck; Lonny R Levin
Journal:  J Pharmacol Exp Ther       Date:  2011-06-10       Impact factor: 4.030

7.  Determinants of the heme-CO vibrational modes in the H-NOX family.

Authors:  Rosalie Tran; Emily E Weinert; Elizabeth M Boon; Richard A Mathies; Michael A Marletta
Journal:  Biochemistry       Date:  2011-07-11       Impact factor: 3.162

8.  YC-1 binding to the β subunit of soluble guanylyl cyclase overcomes allosteric inhibition by the α subunit.

Authors:  Rahul Purohit; Bradley G Fritz; Juliana The; Aaron Issaian; Andrzej Weichsel; Cynthia L David; Eric Campbell; Andrew C Hausrath; Leida Rassouli-Taylor; Elsa D Garcin; Matthew J Gage; William R Montfort
Journal:  Biochemistry       Date:  2013-12-30       Impact factor: 3.162

Review 9.  Structure and Activation of Soluble Guanylyl Cyclase, the Nitric Oxide Sensor.

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Journal:  Antioxid Redox Signal       Date:  2016-04-26       Impact factor: 8.401

10.  CO, NO and O2 as Vibrational Probes of Heme Protein Interactions.

Authors:  Thomas G Spiro; Alexandra V Soldatova; Gurusamy Balakrishnan
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