Literature DB >> 20351908

QA-driven guidelines generation for bacteriotherapy.

Emilie Pasche1, Douglas Teodoro, Julien Gobeill, Patrick Ruch, Christian Lovis.   

Abstract

PURPOSE: We propose a question-answering (QA) driven generation approach for automatic acquisition of structured rules that can be used in a knowledge authoring tool for antibiotic prescription guidelines management.
METHODS: The rule generation is seen as a question-answering problem, where the parameters of the questions are known items of the rule (e.g. an infectious disease, caused by a given bacterium) and answers (e.g. some antibiotics) are obtained by a question-answering engine.
RESULTS: When looking for a drug given a pathogen and a disease, top-precision of 0.55 is obtained by the combination of the Boolean engine (PubMed) and the relevance-driven engine (easyIR), which means that for more than half of our evaluation benchmark at least one of the recommended antibiotics was automatically acquired by the rule generation method.
CONCLUSION: These results suggest that such an automatic text mining approach could provide a useful tool for guidelines management, by improving knowledge update and discovery.

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Year:  2009        PMID: 20351908      PMCID: PMC2815424     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  8 in total

1.  Epidemiological observations of the judicious use of antibiotics in a pediatric teaching hospital.

Authors:  Yamileth Mora; María L Avila-Agüero; María A Umaña; Ana L Jiménez; María M París; Idis Faingezicht
Journal:  Int J Infect Dis       Date:  2002-03       Impact factor: 3.623

Review 2.  The epidemiology of antibiotic resistance.

Authors:  I M Gould
Journal:  Int J Antimicrob Agents       Date:  2008-08-30       Impact factor: 5.283

3.  DebugIT for patient safety - improving the treatment with antibiotics through multimedia data mining of heterogeneous clinical data.

Authors:  Christian Lovis; Dirk Colaert; Veli N Stroetmann
Journal:  Stud Health Technol Inform       Date:  2008

4.  Automatic medical knowledge acquisition using question-answering.

Authors:  Emilie Pasche; Douglas Teodoro; Julien Gobeill; Patrick Ruch; Christian Lovis
Journal:  Stud Health Technol Inform       Date:  2009

5.  Use of antibiotic agents in a large teaching hospital. The impact of Antibiotic Guidelines.

Authors:  K Harvey; R Stewart; M Hemming; R Moulds
Journal:  Med J Aust       Date:  1983-09-03       Impact factor: 7.738

6.  Differential correlation between rates of antimicrobial drug consumption and prevalence of antimicrobial resistance in a tertiary care hospital in Greece.

Authors:  Elias Iosifidis; Charalampos Antachopoulos; Maria Tsivitanidou; Aspasia Katragkou; Evagelia Farmaki; Maria Tsiakou; Theano Kyriazi; Danai Sofianou; Emmanuel Roilides
Journal:  Infect Control Hosp Epidemiol       Date:  2008-07       Impact factor: 3.254

7.  Implementing antibiotic practice guidelines through computer-assisted decision support: clinical and financial outcomes.

Authors:  S L Pestotnik; D C Classen; R S Evans; J P Burke
Journal:  Ann Intern Med       Date:  1996-05-15       Impact factor: 25.391

8.  Automatic medical encoding with SNOMED categories.

Authors:  Patrick Ruch; Julien Gobeill; Christian Lovis; Antoine Geissbühler
Journal:  BMC Med Inform Decis Mak       Date:  2008-10-27       Impact factor: 2.796

  8 in total
  2 in total

1.  Improving average ranking precision in user searches for biomedical research datasets.

Authors:  Douglas Teodoro; Luc Mottin; Julien Gobeill; Arnaud Gaudinat; Thérèse Vachon; Patrick Ruch
Journal:  Database (Oxford)       Date:  2017-01-01       Impact factor: 3.451

2.  Assisted knowledge discovery for the maintenance of clinical guidelines.

Authors:  Emilie Pasche; Patrick Ruch; Douglas Teodoro; Angela Huttner; Stephan Harbarth; Julien Gobeill; Rolf Wipfli; Christian Lovis
Journal:  PLoS One       Date:  2013-04-30       Impact factor: 3.240

  2 in total

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