Literature DB >> 20350600

Zernike phase contrast cryo-electron tomography.

Radostin Danev1, Shuji Kanamaru, Michael Marko, Kuniaki Nagayama.   

Abstract

Cryo-tomography in the electron microscope is unique in its ability to provide high-resolution, three-dimensional structural information about cells, organelles and macromolecules in a nearly native, frozen-hydrated state. However, the phase-contrast imaging method used in conventional cryo-electron tomography fails to faithfully represent the full range of structural features in such specimens. Only certain features are recorded with adequate contrast, and overall contrast is low. The recently developed Zernike phase contrast method has the potential to solve this problem, and here we apply it for the first time to cryo-electron tomography. The new method has uniform transfer characteristics for a wide range of spatial frequencies, leading to improved overall signal-to-noise ratio and raising the prospects of higher resolution and quantitative representation of specimen densities in the reconstructed tomograms. Copyright 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20350600     DOI: 10.1016/j.jsb.2010.03.013

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  25 in total

1.  Retrofit implementation of Zernike phase plate imaging for cryo-TEM.

Authors:  Michael Marko; Ardean Leith; Chyongere Hsieh; Radostin Danev
Journal:  J Struct Biol       Date:  2011-01-25       Impact factor: 2.867

2.  Methods for testing Zernike phase plates and a report on silicon-based phase plates with reduced charging and improved ageing characteristics.

Authors:  Michael Marko; Xing Meng; Chyongere Hsieh; James Roussie; Christopher Striemer
Journal:  J Struct Biol       Date:  2013-08-28       Impact factor: 2.867

3.  Structural analysis of respiratory syncytial virus reveals the position of M2-1 between the matrix protein and the ribonucleoprotein complex.

Authors:  Gabriella Kiss; Jens M Holl; Grant M Williams; Eric Alonas; Daryll Vanover; Aaron W Lifland; Manasa Gudheti; Ricardo C Guerrero-Ferreira; Vinod Nair; Hong Yi; Barney S Graham; Philip J Santangelo; Elizabeth R Wright
Journal:  J Virol       Date:  2014-04-23       Impact factor: 5.103

Review 4.  Reaching the information limit in cryo-EM of biological macromolecules: experimental aspects.

Authors:  Robert M Glaeser; Richard J Hall
Journal:  Biophys J       Date:  2011-05-18       Impact factor: 4.033

5.  Volta potential phase plate for in-focus phase contrast transmission electron microscopy.

Authors:  Radostin Danev; Bart Buijsse; Maryam Khoshouei; Jürgen M Plitzko; Wolfgang Baumeister
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-20       Impact factor: 11.205

6.  Electron tomography of paracrystalline 2D arrays.

Authors:  Hanspeter Winkler; Shenping Wu; Kenneth A Taylor
Journal:  Methods Mol Biol       Date:  2013

7.  Cryo-scanning transmission electron tomography of vitrified cells.

Authors:  Sharon Grayer Wolf; Lothar Houben; Michael Elbaum
Journal:  Nat Methods       Date:  2014-02-16       Impact factor: 28.547

8.  Gum-Net: Unsupervised Geometric Matching for Fast and Accurate 3D Subtomogram Image Alignment and Averaging.

Authors:  Xiangrui Zeng; Min Xu
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2020-08-05

Review 9.  Cryo-electron tomography of bacterial viruses.

Authors:  Ricardo C Guerrero-Ferreira; Elizabeth R Wright
Journal:  Virology       Date:  2013-01-05       Impact factor: 3.616

10.  Effect of fringe-artifact correction on sub-tomogram averaging from Zernike phase-plate cryo-TEM.

Authors:  Gregory P Kishchenko; Radostin Danev; Rebecca Fisher; Jie He; Chyongere Hsieh; Michael Marko; Haixin Sui
Journal:  J Struct Biol       Date:  2015-07-22       Impact factor: 2.867

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