Literature DB >> 20349256

Anthranilate derivatives as TACE inhibitors: docking based CoMFA and CoMSIA analyses.

Malkeet Singh Bahia1, Shravan Kumar Gunda, Shwetha Reddy Gade, Saikh Mahmood, Ravikumar Muttineni, Om Silakari.   

Abstract

Anthranilic acid based derivatives (ANTs) have been identified as a novel class of potent tumor necrosis factor-α converting enzyme (TACE) inhibitors. A computational strategy based on molecular docking studies, followed by CoMFA and CoMSIA analyses has been performed to elucidate the atomic details of the TACE/ANT interactions and also to identify the most important features impacting TACE inhibitory activity of ANTs. The CoMSIA model resulted to be slightly more predictive than CoMFA model, and gave conventional r² 0.991, r²(cv) 0.793, q² 0.777, SEE 0.050, F-value 655.610, and r²(test) 0.871. The 3D-QSAR field contributions and the structural features of the TACE binding site showed a good correlation. These studies will be useful to design new TACE inhibitors with improved potency.

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Year:  2010        PMID: 20349256     DOI: 10.1007/s00894-010-0695-7

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  31 in total

Review 1.  Ligand-protein docking and rational drug design.

Authors:  T P Lybrand
Journal:  Curr Opin Struct Biol       Date:  1995-04       Impact factor: 6.809

2.  TACE and other ADAM proteases as targets for drug discovery.

Authors:  M L. Moss; J M. White; M H. Lambert; R C. Andrews
Journal:  Drug Discov Today       Date:  2001-04-01       Impact factor: 7.851

3.  Molecular similarity indices in a comparative analysis (CoMSIA) of drug molecules to correlate and predict their biological activity.

Authors:  G Klebe; U Abraham; T Mietzner
Journal:  J Med Chem       Date:  1994-11-25       Impact factor: 7.446

4.  A comparison of the binding sites of matrix metalloproteinases and tumor necrosis factor-alpha converting enzyme: implications for selectivity.

Authors:  Viera Lukacova; Yufen Zhang; Daniel M Kroll; Soumyendu Raha; Dogan Comez; Stefan Balaz
Journal:  J Med Chem       Date:  2005-04-07       Impact factor: 7.446

5.  Synthesis and biological activity of selective pipecolic acid-based TNF-alpha converting enzyme (TACE) inhibitors.

Authors:  Michael A Letavic; Matt Z Axt; John T Barberia; Thomas J Carty; Dennis E Danley; Kieran F Geoghegan; Nadia S Halim; Lise R Hoth; Ajith V Kamath; Ellen R Laird; Lori L Lopresti-Morrow; Kim F McClure; Peter G Mitchell; Vijayalakshmi Natarajan; Mark C Noe; Jayvardhan Pandit; Lisa Reeves; Gayle K Schulte; Sheri L Snow; Francis J Sweeney; Douglas H Tan; Chul H Yu
Journal:  Bioorg Med Chem Lett       Date:  2002-05-20       Impact factor: 2.823

6.  The discovery of anthranilic acid-based MMP inhibitors. Part 3: incorporation of basic amines.

Authors:  J I Levin; J M Chen; M T Du; F C Nelson; T Wehr; J F DiJoseph; L M Killar; S Skala; A Sung; M A Sharr; C E Roth; G Jin; R Cowling; L Di; M Sherman; Z B Xu; C J March; K M Mohler; R A Black; J S Skotnicki
Journal:  Bioorg Med Chem Lett       Date:  2001-11-19       Impact factor: 2.823

7.  A continuous fluorimetric assay for tumor necrosis factor-alpha converting enzyme.

Authors:  Guixian Jin; Xinyi Huang; Roy Black; Martin Wolfson; Charles Rauch; Herbert McGregor; George Ellestad; Rebecca Cowling
Journal:  Anal Biochem       Date:  2002-03-15       Impact factor: 3.365

Review 8.  Structure and functions of tumor necrosis factor-alpha converting enzyme.

Authors:  Renata Mezyk; Monika Bzowska; Joanna Bereta
Journal:  Acta Biochim Pol       Date:  2003       Impact factor: 2.149

9.  Three-dimensional quantitative structure-activity relationship of human immunodeficiency virus (I) protease inhibitors. 2. Predictive power using limited exploration of alternate binding modes.

Authors:  T I Oprea; C L Waller; G R Marshall
Journal:  J Med Chem       Date:  1994-07-08       Impact factor: 7.446

10.  An essential role for ectodomain shedding in mammalian development.

Authors:  J J Peschon; J L Slack; P Reddy; K L Stocking; S W Sunnarborg; D C Lee; W E Russell; B J Castner; R S Johnson; J N Fitzner; R W Boyce; N Nelson; C J Kozlosky; M F Wolfson; C T Rauch; D P Cerretti; R J Paxton; C J March; R A Black
Journal:  Science       Date:  1998-11-13       Impact factor: 47.728

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  1 in total

1.  Metabolic Engineering of Pseudomonas putida KT2440 to Produce Anthranilate from Glucose.

Authors:  Jannis Kuepper; Jasmin Dickler; Michael Biggel; Swantje Behnken; Gernot Jäger; Nick Wierckx; Lars M Blank
Journal:  Front Microbiol       Date:  2015-11-24       Impact factor: 5.640

  1 in total

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