Literature DB >> 20345907

A new bright green-emitting fluorescent protein--engineered monomeric and dimeric forms.

Robielyn P Ilagan1, Elizabeth Rhoades, David F Gruber, Hung-Teh Kao, Vincent A Pieribone, Lynne Regan.   

Abstract

Fluorescent proteins have become essential tools in molecular and biological applications. Here, we present a novel fluorescent protein isolated from warm water coral, Cyphastrea microphthalma. The protein, which we named vivid Verde fluorescent protein (VFP), matures readily at 37 degrees C and emits bright green light. Further characterizations revealed that VFP has a tendency to form dimers. By creating a homology model of VFP, based on the structure of the red fluorescent protein, DsRed, we were able to make mutations that alter the protein's oligomerization state. We present two proteins, mVFP and mVFP1, that are both exclusively monomeric, and one protein, dVFP, which is dimeric. We characterized the spectroscopic properties of VFP and its variants in comparison with enhanced green fluorescent protein (EGFP), a widely used variant of GFP. All the VFP variants are at least twice as bright as EGFP. Finally, we demonstrated the effectiveness of the VFP variants in both in vitro and in vivo detection applications.

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Year:  2010        PMID: 20345907      PMCID: PMC2855763          DOI: 10.1111/j.1742-4658.2010.07618.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  54 in total

1.  Fluorescent proteins from nonbioluminescent Anthozoa species.

Authors:  M V Matz; A F Fradkov; Y A Labas; A P Savitsky; A G Zaraisky; M L Markelov; S A Lukyanov
Journal:  Nat Biotechnol       Date:  1999-10       Impact factor: 54.908

2.  Biochemistry, mutagenesis, and oligomerization of DsRed, a red fluorescent protein from coral.

Authors:  G S Baird; D A Zacharias; R Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-24       Impact factor: 11.205

3.  The structure of the chromophore within DsRed, a red fluorescent protein from coral.

Authors:  L A Gross; G S Baird; R C Hoffman; K K Baldridge; R Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-24       Impact factor: 11.205

4.  The structural basis for red fluorescence in the tetrameric GFP homolog DsRed.

Authors:  M A Wall; M Socolich; R Ranganathan
Journal:  Nat Struct Biol       Date:  2000-12

5.  Rapidly maturing variants of the Discosoma red fluorescent protein (DsRed).

Authors:  Brooke J Bevis; Benjamin S Glick
Journal:  Nat Biotechnol       Date:  2002-01       Impact factor: 54.908

6.  A monomeric red fluorescent protein.

Authors:  Robert E Campbell; Oded Tour; Amy E Palmer; Paul A Steinbach; Geoffrey S Baird; David A Zacharias; Roger Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

7.  A photoactivatable GFP for selective photolabeling of proteins and cells.

Authors:  George H Patterson; Jennifer Lippincott-Schwartz
Journal:  Science       Date:  2002-09-13       Impact factor: 47.728

8.  An optical marker based on the UV-induced green-to-red photoconversion of a fluorescent protein.

Authors:  Ryoko Ando; Hiroshi Hama; Miki Yamamoto-Hino; Hideaki Mizuno; Atsushi Miyawaki
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-23       Impact factor: 11.205

9.  A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications.

Authors:  Takeharu Nagai; Keiji Ibata; Eun Sun Park; Mie Kubota; Katsuhiko Mikoshiba; Atsushi Miyawaki
Journal:  Nat Biotechnol       Date:  2002-01       Impact factor: 54.908

10.  Refined crystal structure of DsRed, a red fluorescent protein from coral, at 2.0-A resolution.

Authors:  D Yarbrough; R M Wachter; K Kallio; M V Matz; S J Remington
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-16       Impact factor: 11.205

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  12 in total

1.  Stimuli-responsive smart gels realized via modular protein design.

Authors:  Tijana Z Grove; Chinedum O Osuji; Jason D Forster; Eric R Dufresne; Lynne Regan
Journal:  J Am Chem Soc       Date:  2010-10-13       Impact factor: 15.419

Review 2.  Protein design: Past, present, and future.

Authors:  Lynne Regan; Diego Caballero; Michael R Hinrichsen; Alejandro Virrueta; Danielle M Williams; Corey S O'Hern
Journal:  Biopolymers       Date:  2015-07       Impact factor: 2.505

3.  Water Diffusion In And Out Of The β-Barrel Of GFP and The Fast Maturing Fluorescent Protein, TurboGFP.

Authors:  Binsen Li; Ramza Shahid; Paola Peshkepija; Marc Zimmer
Journal:  Chem Phys       Date:  2011-11-19       Impact factor: 2.348

4.  Single action potentials and subthreshold electrical events imaged in neurons with a fluorescent protein voltage probe.

Authors:  Lei Jin; Zhou Han; Jelena Platisa; Julian R A Wooltorton; Lawrence B Cohen; Vincent A Pieribone
Journal:  Neuron       Date:  2012-09-06       Impact factor: 17.173

5.  The cytoplasmic domain is essential for transport function of the integral membrane transport protein SLC4A11.

Authors:  Sampath K Loganathan; Chris M Lukowski; Joseph R Casey
Journal:  Am J Physiol Cell Physiol       Date:  2015-11-18       Impact factor: 4.249

6.  Structure-guided evolution of cyan fluorescent proteins towards a quantum yield of 93%.

Authors:  Joachim Goedhart; David von Stetten; Marjolaine Noirclerc-Savoye; Mickaël Lelimousin; Linda Joosen; Mark A Hink; Laura van Weeren; Theodorus W J Gadella; Antoine Royant
Journal:  Nat Commun       Date:  2012-03-20       Impact factor: 14.919

7.  Improving recombinant protein production in the Chlamydomonas reinhardtii chloroplast using vivid Verde Fluorescent Protein as a reporter.

Authors:  Stephanie Braun-Galleani; Frank Baganz; Saul Purton
Journal:  Biotechnol J       Date:  2015-07-06       Impact factor: 4.677

8.  Molecular evolution of versatile derivatives from a GFP-like protein in the marine copepod Chiridius poppei.

Authors:  Akihisa Shimizu; Ikuo Shiratori; Katsunori Horii; Iwao Waga
Journal:  PLoS One       Date:  2017-07-11       Impact factor: 3.240

9.  Transcriptome deep-sequencing and clustering of expressed isoforms from Favia corals.

Authors:  Shaadi F Pooyaei Mehr; Rob DeSalle; Hung-Teh Kao; Apurva Narechania; Zhou Han; Dan Tchernov; Vincent Pieribone; David F Gruber
Journal:  BMC Genomics       Date:  2013-08-12       Impact factor: 3.969

10.  Spectral and structural comparison between bright and dim green fluorescent proteins in Amphioxus.

Authors:  Erin K Bomati; Joy E Haley; Joseph P Noel; Dimitri D Deheyn
Journal:  Sci Rep       Date:  2014-06-27       Impact factor: 4.379

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