Literature DB >> 20231293

DNase I hypersensitivity and epsilon-globin transcriptional enhancement are separable in locus control region (LCR) HS1 mutant human beta-globin YAC transgenic mice.

Motoshi Shimotsuma1, Eiichi Okamura, Hitomi Matsuzaki, Akiyoshi Fukamizu, Keiji Tanimoto.   

Abstract

Expression of the five beta-like globin genes (epsilon, Ggamma, Agamma, delta, beta) in the human beta-globin locus depends on enhancement by the locus control region, which consists of five DNase I hypersensitive sites (5'HS1 through 5'HS5). We report here a novel enhancer activity in 5'HS1 that appears to be potent in transfected K562 cells. Deletion analyses identified a core activating element that bound to GATA-1, and a two-nucleotide mutation that disrupted GATA-1 binding in vitro abrogated 5'HS1 enhancer activity in transfection experiments. To determine the in vivo role of this GATA site, we generated multiple lines of human beta-globin YAC transgenic mice bearing the same two-nucleotide mutation. In the mutant mice, epsilon-, but not gamma-globin, gene expression in primitive erythroid cells was severely attenuated, while adult beta-globin gene expression in definitive erythroid cells was unaffected. Interestingly, DNaseI hypersensitivity near the 5'HS1 mutant sequence was eliminated in definitive erythroid cells, whereas it was only mildly affected in primitive erythroid cells. We therefore conclude that, although the GATA site in 5'HS1 is critical for efficient epsilon-globin gene expression, hypersensitive site formation per se is independent of 5'HS1 function, if any, in definitive erythroid cells.

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Year:  2010        PMID: 20231293      PMCID: PMC2863201          DOI: 10.1074/jbc.M110.116525

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  38 in total

1.  CTCF-dependent enhancer-blocking by alternative chromatin loop formation.

Authors:  Chunhui Hou; Hui Zhao; Keiji Tanimoto; Ann Dean
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-12       Impact factor: 11.205

2.  Independent formation of DnaseI hypersensitive sites in the murine beta-globin locus control region.

Authors:  M A Bender; M G Mehaffey; A Telling; B Hug; T J Ley; M Groudine; S Fiering
Journal:  Blood       Date:  2000-06-01       Impact factor: 22.113

3.  CACCC and GATA-1 sequences make the constitutively expressed alpha-globin gene erythroid-responsive in mouse erythroleukemia cells.

Authors:  S Ren; J Li; G F Atweh
Journal:  Nucleic Acids Res       Date:  1996-01-15       Impact factor: 16.971

4.  Synergistic regulation of human beta-globin gene switching by locus control region elements HS3 and HS4.

Authors:  J Bungert; U Davé; K C Lim; K H Lieuw; J A Shavit; Q Liu; J D Engel
Journal:  Genes Dev       Date:  1995-12-15       Impact factor: 11.361

5.  Developmental regulation of human beta-globin gene transcription: a switch of loyalties?

Authors:  J D Engel
Journal:  Trends Genet       Date:  1993-09       Impact factor: 11.639

6.  Targeted deletion of 5'HS1 and 5'HS4 of the beta-globin locus control region reveals additive activity of the DNaseI hypersensitive sites.

Authors:  M A Bender; J N Roach; J Halow; J Close; R Alami; E E Bouhassira; M Groudine; S N Fiering
Journal:  Blood       Date:  2001-10-01       Impact factor: 22.113

7.  Context-dependent EKLF responsiveness defines the developmental specificity of the human epsilon-globin gene in erythroid cells of YAC transgenic mice.

Authors:  K Tanimoto; Q Liu; F Grosveld; J Bungert; J D Engel
Journal:  Genes Dev       Date:  2000-11-01       Impact factor: 11.361

8.  Functional synergy and physical interactions of the erythroid transcription factor GATA-1 with the Krüppel family proteins Sp1 and EKLF.

Authors:  M Merika; S H Orkin
Journal:  Mol Cell Biol       Date:  1995-05       Impact factor: 4.272

9.  Functional interaction of GATA1 with erythroid Krüppel-like factor and Sp1 at defined erythroid promoters.

Authors:  R C Gregory; D J Taxman; D Seshasayee; M H Kensinger; J J Bieker; D M Wojchowski
Journal:  Blood       Date:  1996-03-01       Impact factor: 22.113

10.  An early haematopoietic defect in mice lacking the transcription factor GATA-2.

Authors:  F Y Tsai; G Keller; F C Kuo; M Weiss; J Chen; M Rosenblatt; F W Alt; S H Orkin
Journal:  Nature       Date:  1994-09-15       Impact factor: 49.962

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  4 in total

1.  Identifying and mapping cell-type-specific chromatin programming of gene expression.

Authors:  Troels T Marstrand; John D Storey
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-27       Impact factor: 11.205

2.  Shift in GATA3 functions, and GATA3 mutations, control progression and clinical presentation in breast cancer.

Authors:  Helit Cohen; Rotem Ben-Hamo; Moriah Gidoni; Ilana Yitzhaki; Renana Kozol; Alona Zilberberg; Sol Efroni
Journal:  Breast Cancer Res       Date:  2014-11-20       Impact factor: 6.466

3.  LCR 5' hypersensitive site specificity for globin gene activation within the active chromatin hub.

Authors:  Kenneth R Peterson; Halyna Fedosyuk; Susanna Harju-Baker
Journal:  Nucleic Acids Res       Date:  2012-10-04       Impact factor: 16.971

4.  The Drosophila Zinc Finger Transcription Factor Ouija Board Controls Ecdysteroid Biosynthesis through Specific Regulation of spookier.

Authors:  Tatsuya Komura-Kawa; Keiko Hirota; Yuko Shimada-Niwa; Rieko Yamauchi; MaryJane Shimell; Tetsuro Shinoda; Akiyoshi Fukamizu; Michael B O'Connor; Ryusuke Niwa
Journal:  PLoS Genet       Date:  2015-12-10       Impact factor: 5.917

  4 in total

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