Literature DB >> 20231047

Optimal search filters for renal information in EMBASE.

Arthur V Iansavichus1, R Brian Haynes, Salimah Z Shariff, Matthew Weir, Nancy L Wilczynski, Ann McKibbon, Faisal Rehman, Amit X Garg.   

Abstract

BACKGROUND: EMBASE is a popular database used to retrieve biomedical information. Our objective was to develop and test search filters to help clinicians and researchers efficiently retrieve articles with renal information in EMBASE. STUDY
DESIGN: We used a diagnostic test assessment framework because filters operate similarly to screening tests. SETTINGS & PARTICIPANTS: We divided a sample of 5,302 articles from 39 journals into development and validation sets of articles. INDEX TEST: Information retrieval properties were assessed by treating each search filter as a "diagnostic test" or screening procedure for the detection of relevant articles. We tested the performance of 1,936,799 search filters made of unique renal terms and their combinations. REFERENCE STANDARD & OUTCOME: The reference standard was manual review of each article. We calculated the sensitivity and specificity of each filter to identify articles with renal information.
RESULTS: The best renal filters consisted of multiple search terms, such as "renal replacement therapy," "renal," "kidney disease," and "proteinuria," and the truncated terms "kidney," "dialy," "neph," "glomerul," and "hemodial." These filters achieved peak sensitivities of 98.7% (95% CI, 97.9-99.6) and specificities of 98.5% (95% CI, 98.0-99.0). The retrieval performance of these filters remained excellent in the validation set of independent articles. LIMITATIONS: The retrieval performance of any search will vary depending on the quality of all search concepts used, not just renal terms.
CONCLUSIONS: We empirically developed and validated high-performance renal search filters for EMBASE. These filters can be programmed into the search engine or used on their own to improve the efficiency of searching.

Entities:  

Mesh:

Year:  2010        PMID: 20231047     DOI: 10.1053/j.ajkd.2009.11.026

Source DB:  PubMed          Journal:  Am J Kidney Dis        ISSN: 0272-6386            Impact factor:   8.860


  6 in total

1.  Developing topic-specific search filters for PubMed with click-through data.

Authors:  J Li; Z Lu
Journal:  Methods Inf Med       Date:  2013-05-13       Impact factor: 2.176

2.  An eUtils toolset and its use for creating a pipeline to link genomics and proteomics analyses to domain-specific biomedical literature.

Authors:  Prakash M Nadkarni; Chirag R Parikh
Journal:  J Clin Bioinforma       Date:  2012-04-16

3.  Search filters to identify geriatric medicine in Medline.

Authors:  Esther M M van de Glind; Barbara C van Munster; René Spijker; Rob J P M Scholten; Lotty Hooft
Journal:  J Am Med Inform Assoc       Date:  2011-09-23       Impact factor: 4.497

4.  A search strategy to identify studies on the prognosis of work disability: a diagnostic test framework.

Authors:  Rob Kok; Jos A H M Verbeek; Babs Faber; Frank J H van Dijk; Jan L Hoving
Journal:  BMJ Open       Date:  2015-05-19       Impact factor: 2.692

5.  Routine development of objectively derived search strategies.

Authors:  Elke Hausner; Siw Waffenschmidt; Thomas Kaiser; Michael Simon
Journal:  Syst Rev       Date:  2012-02-29

6.  OvidSP Medline-to-PubMed search filter translation: a methodology for extending search filter range to include PubMed's unique content.

Authors:  Raechel A Damarell; Jennifer J Tieman; Ruth M Sladek
Journal:  BMC Med Res Methodol       Date:  2013-07-02       Impact factor: 4.615

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.