Literature DB >> 20230741

Chromatin: the final frontier in splicing regulation?

Kristi Fox-Walsh1, Xiang-Dong Fu.   

Abstract

Pre-mRNA splicing, once thought to be a strictly posttranscriptional event in gene expression, is subject to a multitiered network of regulation. Luco et al. now report in Science that this regulation seems to begin with chromatin modifications, suggesting that the histone code may be a prequel to the splicing code. Copyright 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20230741      PMCID: PMC6586464          DOI: 10.1016/j.devcel.2010.03.002

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  11 in total

1.  Gene regulation: Breaking the second genetic code.

Authors:  J Ramón Tejedor; Juan Valcárcel
Journal:  Nature       Date:  2010-05-06       Impact factor: 49.962

Review 2.  Towards understanding of PRC2 binding to RNA.

Authors:  Junli Yan; Bibek Dutta; Yan Ting Hee; Wee-Joo Chng
Journal:  RNA Biol       Date:  2019-01-08       Impact factor: 4.652

3.  Hu proteins regulate alternative splicing by inducing localized histone hyperacetylation in an RNA-dependent manner.

Authors:  Hua-Lin Zhou; Melissa N Hinman; Victoria A Barron; Cuiyu Geng; Guangjin Zhou; Guangbin Luo; Ruth E Siegel; Hua Lou
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-01       Impact factor: 11.205

Review 4.  Mechanisms and consequences of alternative polyadenylation.

Authors:  Dafne Campigli Di Giammartino; Kensei Nishida; James L Manley
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

5.  USP49 deubiquitinates histone H2B and regulates cotranscriptional pre-mRNA splicing.

Authors:  Zhuo Zhang; Amanda Jones; Heui-Yun Joo; Dewang Zhou; Ying Cao; Shaoxia Chen; Hediye Erdjument-Bromage; Matthew Renfrow; Hang He; Paul Tempst; Tim M Townes; Keith E Giles; Ligeng Ma; Hengbin Wang
Journal:  Genes Dev       Date:  2013-07-03       Impact factor: 11.361

Review 6.  Emerging patterns of epigenomic variation.

Authors:  Aleksandar Milosavljevic
Journal:  Trends Genet       Date:  2011-04-18       Impact factor: 11.639

7.  Combinations of histone modifications mark exon inclusion levels.

Authors:  Stefan Enroth; Susanne Bornelöv; Claes Wadelius; Jan Komorowski
Journal:  PLoS One       Date:  2012-01-05       Impact factor: 3.240

8.  Roles of histone deacetylases in epigenetic regulation: emerging paradigms from studies with inhibitors.

Authors:  Geneviève P Delcuve; Dilshad H Khan; James R Davie
Journal:  Clin Epigenetics       Date:  2012-03-12       Impact factor: 6.551

9.  RNA-seq analysis of impact of PNN on gene expression and alternative splicing in corneal epithelial cells.

Authors:  Debra Akin; Jeremy R B Newman; Lauren M McIntyre; Stephen P Sugrue
Journal:  Mol Vis       Date:  2016-01-16       Impact factor: 2.367

10.  Drosophila Kdm4 demethylases in histone H3 lysine 9 demethylation and ecdysteroid signaling.

Authors:  Amy Tsurumi; Pranabananda Dutta; Pranabanada Dutta; Robin Shang; Shian-Jang Yan; Robin Sheng; Willis X Li
Journal:  Sci Rep       Date:  2013-10-08       Impact factor: 4.379

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