Literature DB >> 20222066

Heterokaryotic nuclear conditions and a heterogeneous nuclear population are observed by flow cytometry in Phytophthora infestans.

Mursel Catal1, Louis King, Pavani Tumbalam, Prissana Wiriyajitsomboon, William W Kirk, Gerard C Adams.   

Abstract

A simple and reliable method for preparation of whole nuclei of a common oomycete, Phytophthora infestans, is described for laser flow cytometry. The ease of preparation, the absence of detectable debris and aggregates, and the precision in determinations of DNA content per nucleus improve interpretation and understanding of the genetics of the organism. Phytophthora infestans is the pathogen that causes potato and tomato late blight. The genetic flexibility of P. infestans and other oomycete pathogens has complicated understanding of the mechanisms of variation contributing to shifts in race structure and virulence profiles on important agricultural crops. Significant phenotypic and genotypic changes are being reported in the apparent absence of sexual recombination in the field. Laser flow cytometry with propidium iodide is useful in investigating the nuclear condition of the somatic colony of field strains of P. infestans. The majority of the studied strains contain a single population of nuclei in nonreplicated diplophase. However, mean DNA content per nucleus varies considerably among isolates confirming the heterogeneity of the nuclear population in regard to C-value, for field isolates. Nuclear DNA content varies from 1.75x to 0.75x that of nuclei in a standard strain from central Mexico. Some strains contain two to three populations of nuclei with differing DNA contents in the mycelium and are heterokaryons. Such a range in DNA content suggests DNA-aneuploidy, but direct confirmation of aneuploidy will require microscopy of chromosomes. Heterokaryosis and populations of nuclei of differing DNA content necessarily confound standardized assays used worldwide in crop breeding programs for determination of race profiles and virulence phenotypes of this important pathogen.

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Year:  2010        PMID: 20222066     DOI: 10.1002/cyto.a.20888

Source DB:  PubMed          Journal:  Cytometry A        ISSN: 1552-4922            Impact factor:   4.355


  12 in total

1.  Karyotype variation, spontaneous genome rearrangements affecting chemical insensitivity, and expression level polymorphisms in the plant pathogen Phytophthora infestans revealed using its first chromosome-scale assembly.

Authors:  Michael E H Matson; Qihua Liang; Stefano Lonardi; Howard S Judelson
Journal:  PLoS Pathog       Date:  2022-10-10       Impact factor: 7.464

2.  The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine.

Authors:  Kentaro Yoshida; Verena J Schuenemann; Liliana M Cano; Marina Pais; Bagdevi Mishra; Rahul Sharma; Chirsta Lanz; Frank N Martin; Sophien Kamoun; Johannes Krause; Marco Thines; Detlef Weigel; Hernán A Burbano
Journal:  Elife       Date:  2013-05-28       Impact factor: 8.140

3.  The plant pathogen Phytophthora andina emerged via hybridization of an unknown Phytophthora species and the Irish potato famine pathogen, P. infestans.

Authors:  Erica M Goss; Martha E Cardenas; Kevin Myers; Gregory A Forbes; William E Fry; Silvia Restrepo; Niklaus J Grünwald
Journal:  PLoS One       Date:  2011-09-16       Impact factor: 3.240

4.  Host adaptation and speciation through hybridization and polyploidy in Phytophthora.

Authors:  Lien Bertier; Leen Leus; Liesbet D'hondt; Arthur W A M de Cock; Monica Höfte
Journal:  PLoS One       Date:  2013-12-26       Impact factor: 3.240

5.  Genome-Wide Increased Copy Number is Associated with Emergence of Dominant Clones of the Irish Potato Famine Pathogen Phytophthora infestans.

Authors:  Brian J Knaus; Javier F Tabima; Shankar K Shakya; Howard S Judelson; Niklaus J Grünwald
Journal:  mBio       Date:  2020-06-23       Impact factor: 7.867

6.  Unravelling hybridization in Phytophthora using phylogenomics and genome size estimation.

Authors:  Kris Van Poucke; Annelies Haegeman; Thomas Goedefroit; Fran Focquet; Leen Leus; Marília Horta Jung; Corina Nave; Miguel Angel Redondo; Claude Husson; Kaloyan Kostov; Aneta Lyubenova; Petya Christova; Anne Chandelier; Slavcho Slavov; Arthur de Cock; Peter Bonants; Sabine Werres; Jonàs Oliva Palau; Benoit Marçais; Thomas Jung; Jan Stenlid; Tom Ruttink; Kurt Heungens
Journal:  IMA Fungus       Date:  2021-07-01       Impact factor: 3.515

7.  Computational analyses of ancient pathogen DNA from herbarium samples: challenges and prospects.

Authors:  Kentaro Yoshida; Eriko Sasaki; Sophien Kamoun
Journal:  Front Plant Sci       Date:  2015-09-24       Impact factor: 5.753

8.  Host-induced aneuploidy and phenotypic diversification in the Sudden Oak Death pathogen Phytophthora ramorum.

Authors:  Takao Kasuga; Mai Bui; Elizabeth Bernhardt; Tedmund Swiecki; Kamyar Aram; Liliana M Cano; Joan Webber; Clive Brasier; Caroline Press; Niklaus J Grünwald; David M Rizzo; Matteo Garbelotto
Journal:  BMC Genomics       Date:  2016-05-20       Impact factor: 3.969

9.  Comparative genomics of downy mildews reveals potential adaptations to biotrophy.

Authors:  Kyle Fletcher; Steven J Klosterman; Lida Derevnina; Frank Martin; Lien D Bertier; Steven Koike; Sebastian Reyes-Chin-Wo; Beiquan Mou; Richard Michelmore
Journal:  BMC Genomics       Date:  2018-11-29       Impact factor: 3.969

10.  Insights into evolving global populations of Phytophthora infestans via new complementary mtDNA haplotype markers and nuclear SSRs.

Authors:  Frank N Martin; Yonghong Zhang; David E L Cooke; Mike D Coffey; Niklaus J Grünwald; William E Fry
Journal:  PLoS One       Date:  2019-01-02       Impact factor: 3.240

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