Literature DB >> 20216927

LEVEL SET BASED CLUSTERING FOR ANALYSIS OF FUNCTIONAL MRI DATA.

D R Bathula1, X Papademetris, J S Duncan.   

Abstract

We present a level set based clustering technique to detect activation regions from functional brain images using contextual information. Earlier similar approaches have been primarily concerned with local spatial context. Our approach relies on the idea that voxels within a functional region have similar temporal behavior. Using a level set formulation, a two-dimensional curve is evolved with a speed proportional to a similarity measure between the fMRI signals of voxels lying on the curve and their neighbors in the direction of propagation. The correlation coefficient is used to quantify similarity in time series of adjacent voxels. Simulation results from synthetic images demonstrate that using spatio-temporal contextual information provides better segmentation than a context-free, voxel-wise technique. Results from a real fMRI experiment using auditory stimulation are also presented.

Year:  2007        PMID: 20216927      PMCID: PMC2834251          DOI: 10.1109/ISBI.2007.356877

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  9 in total

1.  Spatial mixture modeling of fMRI data.

Authors:  N V Hartvig; J L Jensen
Journal:  Hum Brain Mapp       Date:  2000-12       Impact factor: 5.038

2.  Bayesian approach to segmentation of statistical parametric maps.

Authors:  J C Rajapakse; J Piyaratna
Journal:  IEEE Trans Biomed Eng       Date:  2001-10       Impact factor: 4.538

3.  Contextual clustering for analysis of functional MRI data.

Authors:  E Salli; H J Aronen; S Savolainen; A Korvenoja; A Visa
Journal:  IEEE Trans Med Imaging       Date:  2001-05       Impact factor: 10.048

4.  Probabilistic independent component analysis for functional magnetic resonance imaging.

Authors:  Christian F Beckmann; Stephen M Smith
Journal:  IEEE Trans Med Imaging       Date:  2004-02       Impact factor: 10.048

5.  Functional Brain Image Analysis Using Joint Function-Structure Priors.

Authors:  Jing Yang; Xenophon Papademetris; Lawrence H Staib; Robert T Schultz; James S Duncan
Journal:  Med Image Comput Comput Assist Interv       Date:  2004-01-01

6.  White matter fiber tract segmentation in DT-MRI using geometric flows.

Authors:  Lisa Jonasson; Xavier Bresson; Patric Hagmann; Olivier Cuisenaire; Reto Meuli; Jean-Philippe Thiran
Journal:  Med Image Anal       Date:  2005-06       Impact factor: 8.545

7.  Active contours without edges.

Authors:  T F Chan; L A Vese
Journal:  IEEE Trans Image Process       Date:  2001       Impact factor: 10.856

8.  Quantification of intensity variations in functional MR images using rotated principal components.

Authors:  W Backfrieder; R Baumgartner; M Sámal; E Moser; H Bergmann
Journal:  Phys Med Biol       Date:  1996-08       Impact factor: 3.609

9.  fMRI signal restoration using a spatio-temporal Markov Random Field preserving transitions.

Authors:  X Descombes; F Kruggel; D Y von Cramon
Journal:  Neuroimage       Date:  1998-11       Impact factor: 6.556

  9 in total

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