Literature DB >> 20211756

Biochemical modeling with Systems Biology Graphical Notation.

Andreas Jansson1, Mats Jirstrand.   

Abstract

The Systems Biology Graphical Notation (SBGN) is an emerging standard for graphical notation developed by an international systems biology community. Standardized graphical notation is crucial for efficient and accurate communication of biological knowledge between researchers with various backgrounds in the expanding field of systems biology. Here, we highlight SBGN from a practical point of view and describe how the user can build and simulate SBGN models from a simple drag-and-drop graphical user interface in PathwayLab. Copyright 2010 Elsevier Ltd. All rights reserved.

Mesh：

Year:  2010        PMID： 20211756     DOI： 10.1016/j.drudis.2010.02.012

Source DB:  PubMed          Journal:  Drug Discov Today        ISSN： 1359-6446            Impact factor:   7.851


  3 in total

1.  Creating interactive, web-based and data-enriched maps with the Systems Biology Graphical Notation.

Authors:  Astrid Junker; Hendrik Rohn; Tobias Czauderna; Christian Klukas; Anja Hartmann; Falk Schreiber
Journal:  Nat Protoc       Date:  2012-03-01       Impact factor: 13.491

Review 2.  Bridging the gaps in systems biology.

Authors:  Marija Cvijovic; Joachim Almquist; Jonas Hagmar; Stefan Hohmann; Hans-Michael Kaltenbach; Edda Klipp; Marcus Krantz; Pedro Mendes; Sven Nelander; Jens Nielsen; Andrea Pagnani; Natasa Przulj; Andreas Raue; Jörg Stelling; Szymon Stoma; Frank Tobin; Judith A H Wodke; Riccardo Zecchina; Mats Jirstrand
Journal:  Mol Genet Genomics       Date:  2014-04-13       Impact factor: 3.291

3.  Conceptual Model-based Systems Biology: mapping knowledge and discovering gaps in the mRNA transcription cycle.

Authors:  Judith Somekh; Mordechai Choder; Dov Dori
Journal:  PLoS One       Date:  2012-12-20       Impact factor: 3.240
  3 in total

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