Literature DB >> 20200246

The first complete papillomavirus genome characterized from a marsupial host: a novel isolate from Bettongia penicillata.

Mark D Bennett1, Andrea Reiss, Hans Stevens, Elisabeth Heylen, Marc Van Ranst, Adrian Wayne, Michael Slaven, Jennifer N Mills, Kristin S Warren, Amanda J O'Hara, Philip K Nicholls.   

Abstract

The first fully sequenced papillomavirus (PV) of marsupials, tentatively named Bettongia penicillata papillomavirus type 1 (BpPV1), was detected in papillomas from a woylie (Bettongia penicillata ogilbyi). The circular, double-stranded DNA genome contains 7,737 bp and encodes 7 open reading frames (ORFs), E6, E7, E1, E2, E4, L2, and L1, in typical PV conformation. BpPV1 is a close-to-root PV with L1 and L2 ORFs most similar to European hedgehog PV and bandicoot papillomatosis carcinomatosis virus types 1 and 2 (BPCV1 and -2). It appears that the BPCVs arose by recombination between an ancient PV and an ancient polyomavirus more than 10 million years ago.

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Year:  2010        PMID： 20200246      PMCID： PMC2863809          DOI： 10.1128/JVI.02635-09

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  22 in total

1.  MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment.

Authors:  Sudhir Kumar; Koichiro Tamura; Masatoshi Nei
Journal:  Brief Bioinform       Date:  2004-06       Impact factor: 11.622

2.  A broad range of human papillomavirus types detected with a general PCR method suitable for analysis of cutaneous tumours and normal skin.

Authors:  Ola Forslund; Annika Antonsson; Peter Nordin; Bo Stenquist; Bengt Göran Hansson
Journal:  J Gen Virol       Date:  1999-09       Impact factor: 3.891

3.  Cutaneous papillomas on an opossum.

Authors:  L D Koller
Journal:  J Natl Cancer Inst       Date:  1972-07       Impact factor: 13.506

4.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

5.  A new papillomavirus of possums (Trichosurus vulpecula) associated with typical wart-like papillomas.

Authors:  M R Perrott; J Meers; G E Greening; S E Farmer; I W Lugton; C R Wilks
Journal:  Arch Virol       Date:  2000       Impact factor: 2.574

6.  Genomic characterization of the first insectivoran papillomavirus reveals an unusually long, second non-coding region and indicates a close relationship to Betapapillomavirus.

Authors:  Eric Schulz; Marc Gottschling; Ignacio G Bravo; Ullrich Wittstatt; Eggert Stockfleth; Ingo Nindl
Journal:  J Gen Virol       Date:  2009-03       Impact factor: 3.891

7.  A sequence-independent strategy for detection and cloning of circular DNA virus genomes by using multiply primed rolling-circle amplification.

Authors:  Annabel Rector; Ruth Tachezy; Marc Van Ranst
Journal:  J Virol       Date:  2004-05       Impact factor: 5.103

8.  Marsupial relationships and a timeline for marsupial radiation in South Gondwana.

Authors:  Maria A Nilsson; Ulfur Arnason; Peter B S Spencer; Axel Janke
Journal:  Gene       Date:  2004-10-13       Impact factor: 3.688

Review 9.  Classification of papillomaviruses.

Authors:  Ethel-Michele de Villiers; Claude Fauquet; Thomas R Broker; Hans-Ulrich Bernard; Harald zur Hausen
Journal:  Virology       Date:  2004-06-20       Impact factor: 3.616

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205
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  10 in total

Review 1.  Human papillomavirus genome variants.

Authors:  Robert D Burk; Ariana Harari; Zigui Chen
Journal:  Virology       Date:  2013-08-31       Impact factor: 3.616

2.  Insights into Polyomaviridae microRNA function derived from study of the bandicoot papillomatosis carcinomatosis viruses.

Authors:  Chun Jung Chen; Rodney P Kincaid; Gil Ju Seo; Mark D Bennett; Christopher S Sullivan
Journal:  J Virol       Date:  2011-02-23       Impact factor: 5.103

3.  Classification and nomenclature system for human Alphapapillomavirus variants: general features, nucleotide landmarks and assignment of HPV6 and HPV11 isolates to variant lineages.

Authors:  Robert D Burk; Zigui Chen; Ariana Harari; Benjamin C Smith; Boštjan J Kocjan; Polona J Maver; Mario Poljak
Journal:  Acta Dermatovenerol Alp Pannonica Adriat       Date:  2011-09

Review 4.  Papillomaviruses: Viral evolution, cancer and evolutionary medicine.

Authors:  Ignacio G Bravo; Marta Félez-Sánchez
Journal:  Evol Med Public Health       Date:  2015-01-28

5.  A Century of Shope Papillomavirus in Museum Rabbit Specimens.

Authors:  Clara Escudero Duch; Richard A J Williams; Robert M Timm; Javier Perez-Tris; Laura Benitez
Journal:  PLoS One       Date:  2015-07-06       Impact factor: 3.240

6.  Association of papillomavirus E6 proteins with either MAML1 or E6AP clusters E6 proteins by structure, function, and evolutionary relatedness.

Authors:  Nicole Brimer; Camille M Drews; Scott B Vande Pol
Journal:  PLoS Pathog       Date:  2017-12-27       Impact factor: 6.823

7.  Fish polyomaviruses belong to two distinct evolutionary lineages.

Authors:  Koenraad Van Doorslaer; Simona Kraberger; Charlotte Austin; Kata Farkas; Melissa Bergeman; Emma Paunil; William Davison; Arvind Varsani
Journal:  J Gen Virol       Date:  2018-03-08       Impact factor: 3.891

8.  Origin and evolution of papillomavirus (onco)genes and genomes.

Authors:  Anouk Willemsen; Ignacio G Bravo
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-05-27       Impact factor: 6.237

9.  The Ancient Evolutionary History of Polyomaviruses.

Authors:  Christopher B Buck; Koenraad Van Doorslaer; Alberto Peretti; Eileen M Geoghegan; Michael J Tisza; Ping An; Joshua P Katz; James M Pipas; Alison A McBride; Alvin C Camus; Alexa J McDermott; Jennifer A Dill; Eric Delwart; Terry F F Ng; Kata Farkas; Charlotte Austin; Simona Kraberger; William Davison; Diana V Pastrana; Arvind Varsani
Journal:  PLoS Pathog       Date:  2016-04-19       Impact factor: 6.823

10.  Temporal Patterns in the Abundance of a Critically Endangered Marsupial Relates to Disturbance by Roads and Agriculture.

Authors:  Georgina J Yeatman; Adrian F Wayne; Harriet R Mills; Jane Prince
Journal:  PLoS One       Date:  2016-08-08       Impact factor: 3.240
  10 in total

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