| Literature DB >> 20198156 |
J Abdollahzadeh1, E Mohammadi Goltapeh, A Javadi, M Shams-Bakhsh, R Zare, A J L Phillips.
Abstract
Species in the Botryosphaeriaceae are well known as pathogens and saprobes of woody hosts, but little is known about the species that occur in Iran. In a recent survey of this family in Iran two fungi with diplodia-like anamorphs were isolated from various tree hosts. These two fungi were fully characterised in terms of morphology of the anamorphs in culture, and sequences of the ITS1/ITS2 regions of the ribosomal DNA operon and partial sequences of the translation elongation factor 1-alpha. Phylogenetic analyses placed them within a clade consisting of Barriopsis and Phaeobotryon species, but they were clearly distinct from known species in these genera. Therefore, they are described here as two new species, namely Barriopsis iraniana on Citrus, Mangifera and Olea, and Phaeobotryon cupressi on Cupressus sempervirens.Entities:
Keywords: Citrus; EF 1-α; ITS; Mangifera; Olea; phylogeny; systematics; taxonomy
Year: 2009 PMID: 20198156 PMCID: PMC2802722 DOI: 10.3767/003158509X467552
Source DB: PubMed Journal: Persoonia ISSN: 0031-5850 Impact factor: 11.051
Isolates included in the phylogenetic study.
| Species | Culture no. | Substrate | Locality | Collector | GenBank | |
|---|---|---|---|---|---|---|
| ITS | EF | |||||
| CBS 174.26 | Cuba | N.E. Stevens | EU673330 | EU673296 | ||
| IRAN1448C | Minab, Iran | J. Abdollahzadeh & A. Javadi | FJ919663 | FJ919652 | ||
| IRAN1449C | Rodan, Iran | J. Abdollahzadeh & A. Javadi | FJ919665 | FJ919654 | ||
| IRAN1450C | Minab, Iran | J. Abdollahzadeh & A. Javadi | FJ919667 | FJ919656 | ||
| IRAN1451C | Minab, Iran | J. Abdollahzadeh & A. Javadi | FJ919668 | FJ919657 | ||
| IRAN1452C | Minab, Iran | J. Abdollahzadeh & A. Javadi | FJ919666 | FJ919655 | ||
| IRAN1453C | Minab, Iran | J. Abdollahzadeh & A. Javadi | FJ919664 | FJ919653 | ||
| CBS119047 | USA | P.V. Oudemans | DQ299245 | EU017539 | ||
| ATCC22927 | USA | R.D. Millholland | DQ299247 | EU673291 | ||
| CBS 110302 | Portugal | A.J.L. Phillips | AY259092 | AY573218 | ||
| CMW 8000 | Switzerland | B. Slippers | AY236949 | AY236898 | ||
| CBS 112549 | Portugal | A. Alves | AY259100 | AY573227 | ||
| CBS 112546 | Spain | M.E. Sánchez & A. Trapero | AY259090 | EU673310 | ||
| CBS 112553 | Portugal | A.J.L. Phillips | AY259093 | AY573219 | ||
| CBS 230.30 | USA | L.L. Huillier | DQ458886 | DQ458869 | ||
| CBS 112555 | Portugal | A.J.L. Phillips | AY259094 | AY573220 | ||
| CBS 119049 | Italy | L. Mugnai | DQ458889 | DQ458874 | ||
| CBS 115041 | Spain | J. Luque | AY573202 | AY573222 | ||
| CBS 113188 | Spain | M.E. Sánchez & A. Trapero | AY573198 | EU673278 | ||
| IMI 63581b | UK | E.A. Ellis | AY573212 | AY573235 | ||
| CBS 115038 | Netherlands | A.J.L. Phillips | AY573206 | AY57322 | ||
| CBS 115812 | South Africa | D. Pavlic | DQ458892 | DQ458877 | ||
| CBS 494.78 | Colombia | O. Rangel | EF622084 | EF622064 | ||
| CBS 456.78 | Colombia | O. Rangel | EF622083 | EF622063 | ||
| CBS 116459 | Costa Rica | J. Carranza-Velásquez | EF622077 | EF622057 | ||
| CBS 374.54 | Zaire | Unknown | EF622080 | EF622059 | ||
| CBS 169.34 | USA | H.S. Fawcett | EU673338 | EU673307 | ||
| CBS 122528 | Spain | F. Garcia | EU673340 | EU673309 | ||
| CBS 448.91 | keratomycosis in eye | UK | Unknown | EU673337 | EU673306 | |
| CBS 110299 | Portugal | A.J.L. Phillips | AY259091 | AY573217 | ||
| CBS 110497 | Portugal | A.J.L. Phillips | EU673311 | EU673277 | ||
| CMW 9081 | New Zealand | G.J. Samuels | AY236943 | AY236888 | ||
| CBS 110301 | Portugal | A.J.L. Phillips | AY259098 | AY573221 | ||
| IRAN1454C | Gorgan, Iran | M.A. Aghajani | FJ919673 | FJ919662 | ||
| IRAN1455C | Gorgan, Iran | M.A. Aghajani | FJ919672 | FJ919661 | ||
| IRAN1456C | Gorgan, Iran | M.A. Aghajani | FJ919670 | FJ919659 | ||
| IRAN1457C | Gorgan, Iran | M.A. Aghajani | FJ919669 | FJ919658 | ||
| IRAN1458C | Gorgan, Iran | M.A. Aghajani | FJ919671 | FJ919660 | ||
| CPC 12440 | Hawaii | W. Gams | EU673332 | EU673298 | ||
| CPC 12442 | Hawaii | W. Gams | EU673333 | EU673299 | ||
| ICMP 16812 | New Zealand | S.R. Pennycook, P.R. Johnston & B.C. Paulus | EU673328 | EU673294 | ||
| ICMP 16818 | New Zealand | S.R. Pennycook, P.R. Johnston & B.C. Paulus | EU673329 | EU673295 | ||
| CBS 110496 | South Africa | J.M. van Niekerk | AY343379 | AY343340 | ||
| CBS 100163 | Luxembourg | H.A. van der Aa | EU673324 | EU673292 | ||
| CBS 186.97 | Germany | T. Graefenhan | EU673325 | EU673293 | ||
| CBS 117009 | Spain | J. Luque & S. Martos | AY905554 | AY905559 | ||
| CBS 117006 | Spain | J. Luque & S. Martos | AY905555 | AY905562 | ||
1 ATCC: American Type Culture Collection; CBS: Centraalbureau voor Schimmelcultures, The Netherlands; CMW: M.J. Wingfield, FABI, University of Pretoria, South Africa; CPC: Collection of Pedro Crous housed at CBS; ICMP: International Collection of Micro-organisms from Plants, Landcare Research, New Zealand; IMI: CABI Bioscience, Egham, UK; IRAN: Iranian Fungal Culture Collection, Iranian Research Institute of Plant Protection, Iran.
2 ITS: Internal transcribed spacers 1 and 2 together with 5.8S nrDNA; EF: Translation elongation factor 1-α partial sequence.
Fig. 1Single most parsimonious tree resulting from maximum parsimony analysis of combined ITS and EF1-α sequence data. MP bootstrap values are given at the nodes. The tree was rooted to two isolates of Pseudofusicoccum stromaticum. The new species are in bold face.
Fig. 2Barriopsis iraniana holotype. a. Conidiomata on pine needles in culture; b, c. conidia developing on conidiogenous cells between paraphyses; d. young conidium showing longitudinal striations while attached to a conidiogenous cell; e. hyaline, striate conidia; f–i. hyaline and brown, striate conidia, 1- and 3-septate conidia can be seen in f and g; j. catenulate chlamydospores. — Scale bars: a = 250 μm; b, c, e–i = 10 μm; d= 5 μm; j = 40 μm.
Fig. 3Phaeobotryon cupressi holotype. a. Conidiomata formed on pine needles in culture; b. sectioned conidioma; c. paraphyses and developing conidia; d, e. microconidiogenous cells; f. microconidia; g. conidia and conidiogenous cells; h. hyaline conidia; i, j. brown, aseptate conidia; k. germinating conidia; l. chlamydospores and a hyaline conidium. — Scale bars: a = 250 μm; b = 100 μm; c, h, i, k, l = 10 μm; d, e = 2.5 μm; f, g, j = 5 μm.