Literature DB >> 20197407

Early initiation of a replication origin tethered at the nuclear periphery.

Hani Ebrahimi1, E Douglas Robertson, Angela Taddei, Susan M Gasser, Anne D Donaldson, Shin-ichiro Hiraga.   

Abstract

Peripheral nuclear localization of chromosomal loci correlates with late replication in yeast and metazoan cells. To test whether peripheral positioning can impose late replication, we examined whether artificial tethering of an early-initiating replication origin to the nuclear periphery delays its replication in budding yeast. We tested the effects of three different peripheral tethering constructs on the time of replication of the early replication origin ARS607. Using the dense-isotope transfer method to assess replication time, we found that ARS607 still replicates early when tethered to the nuclear periphery using the Yif1 protein or a fragment of Sir4, whereas tethering using a Yku80 construct produces only a very slight replication delay. Single-cell microscopic analysis revealed no correlation between peripheral positioning of ARS607 in individual cells and delayed replication. Overall, our results demonstrate that a replication origin can initiate replication early in S phase, even if artificially relocated to the nuclear periphery.

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Year:  2010        PMID: 20197407      PMCID: PMC2844314          DOI: 10.1242/jcs.060392

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  33 in total

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3.  Control of replication timing by a transcriptional silencer.

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Journal:  Curr Biol       Date:  2002-06-04       Impact factor: 10.834

4.  Live imaging of telomeres: yKu and Sir proteins define redundant telomere-anchoring pathways in yeast.

Authors:  Florence Hediger; Frank R Neumann; Griet Van Houwe; Karine Dubrana; Susan M Gasser
Journal:  Curr Biol       Date:  2002-12-23       Impact factor: 10.834

5.  The in vivo replication origin of the yeast 2 microns plasmid.

Authors:  J A Huberman; L D Spotila; K A Nawotka; S M el-Assouli; L R Davis
Journal:  Cell       Date:  1987-11-06       Impact factor: 41.582

6.  Separation of silencing from perinuclear anchoring functions in yeast Ku80, Sir4 and Esc1 proteins.

Authors:  Angela Taddei; Florence Hediger; Frank R Neumann; Christoph Bauer; Susan M Gasser
Journal:  EMBO J       Date:  2004-03-11       Impact factor: 11.598

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Journal:  Genes Dev       Date:  2009-05-01       Impact factor: 11.361

9.  The replication timing program of the Chinese hamster beta-globin locus is established coincident with its repositioning near peripheral heterochromatin in early G1 phase.

Authors:  F Li; J Chen; M Izumi; M C Butler; S M Keezer; D M Gilbert
Journal:  J Cell Biol       Date:  2001-07-23       Impact factor: 10.539

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Journal:  J Cell Biol       Date:  2001-01-22       Impact factor: 10.539

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  16 in total

Review 1.  Location, location, location: it's all in the timing for replication origins.

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Review 2.  Chromatin structure and replication origins: determinants of chromosome replication and nuclear organization.

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Journal:  J Mol Biol       Date:  2014-06-04       Impact factor: 5.469

3.  G2 phase chromatin lacks determinants of replication timing.

Authors:  Junjie Lu; Feng Li; Christopher S Murphy; Michael W Davidson; David M Gilbert
Journal:  J Cell Biol       Date:  2010-06-07       Impact factor: 10.539

Review 4.  Structure and function in the budding yeast nucleus.

Authors:  Angela Taddei; Susan M Gasser
Journal:  Genetics       Date:  2012-09       Impact factor: 4.562

Review 5.  Replicating Large Genomes: Divide and Conquer.

Authors:  Juan Carlos Rivera-Mulia; David M Gilbert
Journal:  Mol Cell       Date:  2016-06-02       Impact factor: 17.970

6.  Shelterin promotes tethering of late replication origins to telomeres for replication-timing control.

Authors:  Shiho Ogawa; Sayuri Kido; Tetsuya Handa; Hidesato Ogawa; Haruhiko Asakawa; Tatsuro S Takahashi; Takuro Nakagawa; Yasushi Hiraoka; Hisao Masukata
Journal:  EMBO J       Date:  2018-07-11       Impact factor: 11.598

7.  Mapping replication timing domains genome wide in single mammalian cells with single-cell DNA replication sequencing.

Authors:  Hisashi Miura; Saori Takahashi; Takahiro Shibata; Koji Nagao; Chikashi Obuse; Katsuzumi Okumura; Masato Ogata; Ichiro Hiratani; Shin-Ichiro Takebayashi
Journal:  Nat Protoc       Date:  2020-11-23       Impact factor: 13.491

8.  TFIIIC localizes budding yeast ETC sites to the nuclear periphery.

Authors:  Shin-ichiro Hiraga; Sotirios Botsios; David Donze; Anne D Donaldson
Journal:  Mol Biol Cell       Date:  2012-04-11       Impact factor: 4.138

9.  The sub-cellular localization of Sulfolobus DNA replication.

Authors:  Tamzin Gristwood; Iain G Duggin; Michaela Wagner; Sonja V Albers; Stephen D Bell
Journal:  Nucleic Acids Res       Date:  2012-03-08       Impact factor: 16.971

10.  Functional centromeres determine the activation time of pericentric origins of DNA replication in Saccharomyces cerevisiae.

Authors:  Thomas J Pohl; Bonita J Brewer; M K Raghuraman
Journal:  PLoS Genet       Date:  2012-05-10       Impact factor: 5.917

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