Literature DB >> 20192814

Fluctuations in biological and bioinspired electron-transfer reactions.

Spiros S Skourtis1, David H Waldeck, David N Beratan.   

Abstract

Central to theories of electron transfer (ET) is the idea that nuclear motion generates a transition state that enables electron flow to proceed, but nuclear motion also induces fluctuations in the donor-acceptor (DA) electronic coupling that is the rate-limiting parameter for nonadiabatic ET. The interplay between the DA energy gap and DA coupling fluctuations is particularly noteworthy in biological ET, where flexible protein and mobile water bridges take center stage. Here, we discuss the critical timescales at play for ET reactions in fluctuating media, highlighting issues of the Condon approximation, average medium versus fluctuation-controlled electron tunneling, gated and solvent relaxation controlled electron transfer, and the influence of inelastic tunneling on electronic coupling pathway interferences. Taken together, one may use this framework to establish principles to describe how macromolecular structure and structural fluctuations influence ET reactions. This framework deepens our understanding of ET chemistry in fluctuating media. Moreover, it provides a unifying perspective for biophysical charge-transfer processes and helps to frame new questions associated with energy harvesting and transduction in fluctuating media.

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Year:  2010        PMID: 20192814      PMCID: PMC2883780          DOI: 10.1146/annurev.physchem.012809.103436

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


  39 in total

1.  Use of U-shaped donor-bridge-acceptor molecules to study electron tunneling through nonbonded contacts.

Authors:  Andrew M Napper; Nicholas J Head; Anna M Oliver; Michael J Shephard; Michael N Paddon-Row; I Read; David H Waldeck
Journal:  J Am Chem Soc       Date:  2002-08-28       Impact factor: 15.419

2.  Charge-transfer mechanism for cytochrome c adsorbed on nanometer thick films. Distinguishing frictional control from conformational gating.

Authors:  Dimitri E Khoshtariya; Jianjun Wei; Haiying Liu; Hongjun Yue; David H Waldeck
Journal:  J Am Chem Soc       Date:  2003-06-25       Impact factor: 15.419

3.  Protein electron transfer rates set by the bridging secondary and tertiary structure.

Authors:  D N Beratan; J N Betts; J N Onuchic
Journal:  Science       Date:  1991-05-31       Impact factor: 47.728

4.  Tracing electronic pathways in molecules by using inelastic tunneling spectroscopy.

Authors:  Alessandro Troisi; Jeremy M Beebe; Laura B Picraux; Roger D van Zee; Duncan R Stewart; Mark A Ratner; James G Kushmerick
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-28       Impact factor: 11.205

5.  Turning charge transfer on and off in a molecular interferometer with vibronic pathways.

Authors:  Dequan Xiao; Spiros S Skourtis; Igor V Rubtsov; David N Beratan
Journal:  Nano Lett       Date:  2009-05       Impact factor: 11.189

6.  Dynamical transition, hydrophobic interface, and the temperature dependence of electrostatic fluctuations in proteins.

Authors:  David N Lebard; Dmitry V Matyushov
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-12-01

7.  Electron transfer and electronic conduction through an intervening medium.

Authors:  Peter P Edwards; Harry B Gray; Matthew T J Lodge; Robert J P Williams
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

8.  Dispersed polaron simulations of electron transfer in photosynthetic reaction centers.

Authors:  A Warshel; Z T Chu; W W Parson
Journal:  Science       Date:  1989-10-06       Impact factor: 47.728

9.  Competing electron-transfer pathways in hydrocarbon frameworks: short-circuiting through-bond coupling by nonbonded contacts in rigid U-shaped norbornylogous systems containing a cavity-bound aromatic pendant group.

Authors:  Subhasis Chakrabarti; Min Liu; David H Waldeck; Anna M Oliver; Michael N Paddon-Row
Journal:  J Am Chem Soc       Date:  2007-02-23       Impact factor: 15.419

Review 10.  Steering electrons on moving pathways.

Authors:  David N Beratan; Spiros S Skourtis; Ilya A Balabin; Alexander Balaeff; Shahar Keinan; Ravindra Venkatramani; Dequan Xiao
Journal:  Acc Chem Res       Date:  2009-10-20       Impact factor: 22.384

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  30 in total

1.  Coherence in electron transfer pathways.

Authors:  Spiros S Skourtis; David N Beratan; David H Waldeck
Journal:  Procedia Chem       Date:  2011-01-01

Review 2.  A hybrid approach to simulation of electron transfer in complex molecular systems.

Authors:  Tomáš Kubař; Marcus Elstner
Journal:  J R Soc Interface       Date:  2013-07-24       Impact factor: 4.118

3.  Communication: Microsecond dynamics of the protein and water affect electron transfer in a bacterial bc(1) complex.

Authors:  Daniel R Martin; Dmitry V Matyushov
Journal:  J Chem Phys       Date:  2015-04-28       Impact factor: 3.488

4.  Alternative ground states enable pathway switching in biological electron transfer.

Authors:  Luciano A Abriata; Damián Álvarez-Paggi; Gabriela N Ledesma; Ninian J Blackburn; Alejandro J Vila; Daniel H Murgida
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-10       Impact factor: 11.205

5.  Physical constraints on charge transport through bacterial nanowires.

Authors:  Nicholas F Polizzi; Spiros S Skourtis; David N Beratan
Journal:  Faraday Discuss       Date:  2012       Impact factor: 4.008

6.  Ultrafast dynamics of nonequilibrium electron transfer in photoinduced redox cycle: solvent mediation and conformation flexibility.

Authors:  Ya-Ting Kao; Xunmin Guo; Yi Yang; Zheyun Liu; Ali Hassanali; Qin-Hua Song; Lijuan Wang; Dongping Zhong
Journal:  J Phys Chem B       Date:  2012-07-19       Impact factor: 2.991

7.  Biological charge transfer via flickering resonance.

Authors:  Yuqi Zhang; Chaoren Liu; Alexander Balaeff; Spiros S Skourtis; David N Beratan
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-25       Impact factor: 11.205

Review 8.  Biochemistry and theory of proton-coupled electron transfer.

Authors:  Agostino Migliore; Nicholas F Polizzi; Michael J Therien; David N Beratan
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

9.  Investigations of heme distortion, low-frequency vibrational excitations, and electron transfer in cytochrome c.

Authors:  Yuhan Sun; Abdelkrim Benabbas; Weiqiao Zeng; Jesse G Kleingardner; Kara L Bren; Paul M Champion
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-21       Impact factor: 11.205

10.  Electron hopping through proteins.

Authors:  Jeffrey J Warren; Maraia E Ener; Antonín Vlček; Jay R Winkler; Harry B Gray
Journal:  Coord Chem Rev       Date:  2012-04-05       Impact factor: 22.315

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