Literature DB >> 11092837

Functions and mechanisms of RNA editing.

J M Gott1, R B Emeson.   

Abstract

RNA editing can be broadly defined as any site-specific alteration in an RNA sequence that could have been copied from the template, excluding changes due to processes such as RNA splicing and polyadenylation. Changes in gene expression attributed to editing have been described in organisms from unicellular protozoa to man, and can affect the mRNAs, tRNAs, and rRNAs present in all cellular compartments. These sequence revisions, which include both the insertion and deletion of nucleotides, and the conversion of one base to another, involve a wide range of largely unrelated mechanisms. Recent advances in the development of in vitro editing and transgenic systems for these varied modifications have provided a better understanding of similarities and differences between the biochemical strategies, regulatory sequences, and cellular factors responsible for such RNA processing events.

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Year:  2000        PMID: 11092837     DOI: 10.1146/annurev.genet.34.1.499

Source DB:  PubMed          Journal:  Annu Rev Genet        ISSN: 0066-4197            Impact factor:   16.830


  188 in total

1.  Non-templated addition of nucleotides to the 3' end of nascent RNA during RNA editing in Physarum.

Authors:  Y W Cheng; L M Visomirski-Robic; J M Gott
Journal:  EMBO J       Date:  2001-03-15       Impact factor: 11.598

2.  Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair.

Authors:  C E Huang; J Cruz-Reyes; A G Zhelonkina; S O'Hearn; E Wirtz; B Sollner-Webb
Journal:  EMBO J       Date:  2001-09-03       Impact factor: 11.598

3.  Increased RNA editing and inhibition of hepatitis delta virus replication by high-level expression of ADAR1 and ADAR2.

Authors:  Geetha C Jayan; John L Casey
Journal:  J Virol       Date:  2002-04       Impact factor: 5.103

Review 4.  RNA editing by adenosine deaminases that act on RNA.

Authors:  Brenda L Bass
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

5.  Assembly and function of the RNA editing complex in Trypanosoma brucei requires band III protein.

Authors:  Catherine E Huang; Sean F O'Hearn; Barbara Sollner-Webb
Journal:  Mol Cell Biol       Date:  2002-05       Impact factor: 4.272

6.  Transcription and RNA editing in a soluble in vitro system from Physarum mitochondria.

Authors:  Y W Cheng; J M Gott
Journal:  Nucleic Acids Res       Date:  2000-10-01       Impact factor: 16.971

Review 7.  Kinetoplast DNA network: evolution of an improbable structure.

Authors:  Julius Lukes; D Lys Guilbride; Jan Votýpka; Alena Zíková; Rob Benne; Paul T Englund
Journal:  Eukaryot Cell       Date:  2002-08

8.  tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features.

Authors:  Christian Marck; Henri Grosjean
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

9.  Serotonin 2c receptor RNA editing in major depression and suicide.

Authors:  Rebecca Lyddon; Andrew J Dwork; Mehdi Keddache; Larry J Siever; Stella Dracheva
Journal:  World J Biol Psychiatry       Date:  2012-03-09       Impact factor: 4.132

10.  Trypanosoma brucei RNA editing complex: band II is structurally critical and maintains band V ligase, which is nonessential.

Authors:  Sean F O'Hearn; Catherine E Huang; Mike Hemann; Alevtina Zhelonkina; Barbara Sollner-Webb
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

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