Literature DB >> 20176488

The TATA box regulates TATA-binding protein (TBP) dynamics in vivo.

Laszlo Tora1, H Th Marc Timmers.   

Abstract

Early work established the TATA box as the predominant DNA element of core promoters which directed accurate transcription initiation by RNA polymerase II. This element is recognized by TATA-binding protein (TBP), the central DNA-binding subunit of TFIID. In vitro binding and structural experiments indicate that TBP has a strong preference for TATA and induces severe DNA bending. Recent in vivo studies in Saccharomyces cerevisiae indicate that TBP turnover is higher at TATA-containing than at TATA-less promoters; this turnover seems to be regulated by NC2 and Mot1p. We propose that bending of TATA by TBP acts in synergy with NC2 and Mot1p to release TBP more rapidly from TATA promoters in vivo, thus providing a rationale for the predominance of TATA boxes in highly regulated promoters versus constitutively active TATA-less promoters. Copyright 2010 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20176488     DOI: 10.1016/j.tibs.2010.01.007

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  24 in total

1.  Proteolytic degradation of the Yap1 transcription factor is regulated by subcellular localization and the E3 ubiquitin ligase Not4.

Authors:  Kailash Gulshan; Bernice Thommandru; W Scott Moye-Rowley
Journal:  J Biol Chem       Date:  2012-06-15       Impact factor: 5.157

2.  The H2A/H2B-like histone-fold domain proteins at the crossroad between chromatin and different DNA metabolisms.

Authors:  Nerina Gnesutta; Marco Nardini; Roberto Mantovani
Journal:  Transcription       Date:  2013-05-16

3.  TFIID or not TFIID, a continuing transcriptional SAGA.

Authors:  Slawomir Kubik; Maria Jessica Bruzzone; David Shore
Journal:  EMBO J       Date:  2017-01-09       Impact factor: 11.598

Review 4.  So close, no matter how far: multiple paths connecting transcription to mRNA translation in eukaryotes.

Authors:  Boris Slobodin; Rivka Dikstein
Journal:  EMBO Rep       Date:  2020-08-16       Impact factor: 8.807

Review 5.  One small step for Mot1; one giant leap for other Swi2/Snf2 enzymes?

Authors:  Ramya Viswanathan; David T Auble
Journal:  Biochim Biophys Acta       Date:  2011-05-30

6.  Conformational changes and catalytic inefficiency associated with Mot1-mediated TBP-DNA dissociation.

Authors:  Gregor Heiss; Evelyn Ploetz; Lena Voith von Voithenberg; Ramya Viswanathan; Samson Glaser; Peter Schluesche; Sushi Madhira; Michael Meisterernst; David T Auble; Don C Lamb
Journal:  Nucleic Acids Res       Date:  2019-04-08       Impact factor: 16.971

7.  Karyopherin Kap114p-mediated trans-repression controls ribosomal gene expression under saline stress.

Authors:  Chung-Chi Liao; Sahana Shankar; Wen-Chieh Pi; Chih-Chia Chang; Golam Rizvee Ahmed; Wei-Yi Chen; Kuo-Chiang Hsia
Journal:  EMBO Rep       Date:  2020-06-02       Impact factor: 8.807

8.  Molecular Mechanism of Mot1, a TATA-binding Protein (TBP)-DNA Dissociating Enzyme.

Authors:  Ramya Viswanathan; Jason D True; David T Auble
Journal:  J Biol Chem       Date:  2016-06-02       Impact factor: 5.157

9.  Mot1 redistributes TBP from TATA-containing to TATA-less promoters.

Authors:  Gabriel E Zentner; Steven Henikoff
Journal:  Mol Cell Biol       Date:  2013-10-21       Impact factor: 4.272

10.  Dioxaphosphorinane-constrained nucleic Acid dinucleotides as tools for structural tuning of nucleic acids.

Authors:  Dan-Andrei Catana; Brice-Loïc Renard; Marie Maturano; Corinne Payrastre; Nathalie Tarrat; Jean-Marc Escudier
Journal:  J Nucleic Acids       Date:  2012-10-24
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.