Literature DB >> 20172804

Using point process models to compare neural spiking activity in the subthalamic nucleus of Parkinson's patients and a healthy primate.

Sridevi V Sarma1, Uri T Eden, Ming L Cheng, Ziv M Williams, Rollin Hu, Emad Eskandar, Emery N Brown.   

Abstract

Placement of deep brain stimulating electrodes in the subthalamic nucleus (STN) to treat Parkinson's disease (PD) also allows the recording of single neuron spiking activity. Analyses of these unique data offer an important opportunity to better understand the pathophysiology of PD. Despite the point process nature of PD neural spiking activity, point process methods are rarely used to analyze these recordings. We develop a point process representation of PD neural spiking activity using a generalized linear model to describe long- and short-term temporal dependencies in the spiking activity of 28 STN neurons from seven PD patients and 35 neurons from one healthy primate (surrogate control) recorded, while the subjects executed a directed-hand movement task. We used the point process model to characterize each neuron's bursting, oscillatory, and directional tuning properties during key periods in the task trial. Relative to the control neurons, the PD neurons showed increased bursting, increased 10-30 Hz oscillations, and increased fluctuations in directional tuning. These features, which traditional methods failed to capture accurately, were efficiently summarized in a single model in the point process analysis of each neuron. The point process framework suggests a useful approach for developing quantitative neural correlates that may be related directly to the movement and behavioral disorders characteristic of PD.

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Year:  2010        PMID: 20172804      PMCID: PMC3822781          DOI: 10.1109/TBME.2009.2039213

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  32 in total

1.  The time-rescaling theorem and its application to neural spike train data analysis.

Authors:  Emery N Brown; Riccardo Barbieri; Valérie Ventura; Robert E Kass; Loren M Frank
Journal:  Neural Comput       Date:  2002-02       Impact factor: 2.026

2.  Involvement of the human subthalamic nucleus in movement preparation.

Authors:  G Paradiso; J A Saint-Cyr; A M Lozano; A E Lang; R Chen
Journal:  Neurology       Date:  2003-12-09       Impact factor: 9.910

Review 3.  Multiple neural spike train data analysis: state-of-the-art and future challenges.

Authors:  Emery N Brown; Robert E Kass; Partha P Mitra
Journal:  Nat Neurosci       Date:  2004-05       Impact factor: 24.884

4.  A point process framework for relating neural spiking activity to spiking history, neural ensemble, and extrinsic covariate effects.

Authors:  Wilson Truccolo; Uri T Eden; Matthew R Fellows; John P Donoghue; Emery N Brown
Journal:  J Neurophysiol       Date:  2004-09-08       Impact factor: 2.714

5.  Oscillatory activity in the basal ganglia--relationship to normal physiology and pathophysiology.

Authors:  Jonathan Dostrovsky; Hagai Bergman
Journal:  Brain       Date:  2004-04       Impact factor: 13.501

Review 6.  The functional anatomy of basal ganglia disorders.

Authors:  R L Albin; A B Young; J B Penney
Journal:  Trends Neurosci       Date:  1989-10       Impact factor: 13.837

7.  Parkinsonism: onset, progression and mortality.

Authors:  M M Hoehn; M D Yahr
Journal:  Neurology       Date:  1967-05       Impact factor: 9.910

8.  Timing and direction selectivity of subthalamic and pallidal neurons in patients with Parkinson disease.

Authors:  Ziv M Williams; Joseph S Neimat; G Rees Cosgrove; Emad N Eskandar
Journal:  Exp Brain Res       Date:  2005-01-06       Impact factor: 1.972

9.  Dependence of subthalamic nucleus oscillations on movement and dopamine in Parkinson's disease.

Authors:  Ron Levy; Peter Ashby; William D Hutchison; Anthony E Lang; Andres M Lozano; Jonathan O Dostrovsky
Journal:  Brain       Date:  2002-06       Impact factor: 13.501

Review 10.  Move to the rhythm: oscillations in the subthalamic nucleus-external globus pallidus network.

Authors:  Mark D Bevan; Peter J Magill; David Terman; J Paul Bolam; Charles J Wilson
Journal:  Trends Neurosci       Date:  2002-10       Impact factor: 13.837

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  27 in total

1.  The statistical analysis of partially confounded covariates important to neural spiking.

Authors:  Kyle Q Lepage; Christopher J Macdonald; Howard Eichenbaum; Uri T Eden
Journal:  J Neurosci Methods       Date:  2012-01-17       Impact factor: 2.390

2.  Modeling the motor striatum under Deep Brain Stimulation in normal and MPTP conditions.

Authors:  S Santaniello; J T Gale; E B Montgomery; S V Sarma
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

3.  Restoring the basal ganglia in Parkinson's disease to normal via multi-input phase-shifted deep brain stimulation.

Authors:  Rahul Agarwal; Sridevi V Sarma
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

4.  System identification of local field potentials under deep brain stimulation in a healthy primate.

Authors:  Gilda Pedoto; Sabato Santaniello; Erwin B Montgomery; John T Gale; Giovanni Fiengo; Luigi Glielmo; Sridevi V Sarma
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

5.  Point process models show temporal dependencies of basal ganglia nuclei under deep brain stimulation.

Authors:  Shreya Saxena; Sabato Santaniello; Erwin B Montgomery; John T Gale; Sridevi V Sarma
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

6.  Modeling the effects of Deep Brain Stimulation on sensorimotor cortex in normal and MPTP conditions.

Authors:  S Santaniello; J T Gale; E B Montgomery; S V Sarma
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

7.  A point process approach to identifying and tracking transitions in neural spiking dynamics in the subthalamic nucleus of Parkinson's patients.

Authors:  Xinyi Deng; Emad N Eskandar; Uri T Eden
Journal:  Chaos       Date:  2013-12       Impact factor: 3.642

8.  Therapeutic mechanisms of high-frequency stimulation in Parkinson's disease and neural restoration via loop-based reinforcement.

Authors:  Sabato Santaniello; Michelle M McCarthy; Erwin B Montgomery; John T Gale; Nancy Kopell; Sridevi V Sarma
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-26       Impact factor: 11.205

9.  Modeling task-specific neuronal ensembles improves decoding of grasp.

Authors:  Ryan J Smith; Alcimar B Soares; Adam G Rouse; Marc H Schieber; Nitish V Thakor
Journal:  J Neural Eng       Date:  2018-02-02       Impact factor: 5.379

Review 10.  Systems approaches to optimizing deep brain stimulation therapies in Parkinson's disease.

Authors:  Sabato Santaniello; John T Gale; Sridevi V Sarma
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2018-03-20
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