Literature DB >> 24387581

A point process approach to identifying and tracking transitions in neural spiking dynamics in the subthalamic nucleus of Parkinson's patients.

Xinyi Deng1, Emad N Eskandar2, Uri T Eden1.   

Abstract

Understanding the role of rhythmic dynamics in normal and diseased brain function is an important area of research in neural electrophysiology. Identifying and tracking changes in rhythms associated with spike trains present an additional challenge, because standard approaches for continuous-valued neural recordings--such as local field potential, magnetoencephalography, and electroencephalography data--require assumptions that do not typically hold for point process data. Additionally, subtle changes in the history dependent structure of a spike train have been shown to lead to robust changes in rhythmic firing patterns. Here, we propose a point process modeling framework to characterize the rhythmic spiking dynamics in spike trains, test for statistically significant changes to those dynamics, and track the temporal evolution of such changes. We first construct a two-state point process model incorporating spiking history and develop a likelihood ratio test to detect changes in the firing structure. We then apply adaptive state-space filters and smoothers to track these changes through time. We illustrate our approach with a simulation study as well as with experimental data recorded in the subthalamic nucleus of Parkinson's patients performing an arm movement task. Our analyses show that during the arm movement task, neurons underwent a complex pattern of modulation of spiking intensity characterized initially by a release of inhibitory control at 20-40 ms after a spike, followed by a decrease in excitatory influence at 40-60 ms after a spike.

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Year:  2013        PMID: 24387581      PMCID: PMC3808419          DOI: 10.1063/1.4818546

Source DB:  PubMed          Journal:  Chaos        ISSN: 1054-1500            Impact factor:   3.642


  34 in total

1.  The time-rescaling theorem and its application to neural spike train data analysis.

Authors:  Emery N Brown; Riccardo Barbieri; Valérie Ventura; Robert E Kass; Loren M Frank
Journal:  Neural Comput       Date:  2002-02       Impact factor: 2.026

Review 2.  Multiple neural spike train data analysis: state-of-the-art and future challenges.

Authors:  Emery N Brown; Robert E Kass; Partha P Mitra
Journal:  Nat Neurosci       Date:  2004-05       Impact factor: 24.884

3.  A point process framework for relating neural spiking activity to spiking history, neural ensemble, and extrinsic covariate effects.

Authors:  Wilson Truccolo; Uri T Eden; Matthew R Fellows; John P Donoghue; Emery N Brown
Journal:  J Neurophysiol       Date:  2004-09-08       Impact factor: 2.714

4.  Altered subthalamo-pallidal synchronisation in parkinsonian dyskinesias.

Authors:  G Foffani; G Ardolino; B Meda; M Egidi; P Rampini; E Caputo; G Baselli; A Priori
Journal:  J Neurol Neurosurg Psychiatry       Date:  2005-03       Impact factor: 10.154

5.  Dopamine dependency of oscillations between subthalamic nucleus and pallidum in Parkinson's disease.

Authors:  P Brown; A Oliviero; P Mazzone; A Insola; P Tonali; V Di Lazzaro
Journal:  J Neurosci       Date:  2001-02-01       Impact factor: 6.167

6.  Schizophrenia: reduced signal-to-noise ratio and impaired phase-locking during information processing.

Authors:  G Winterer; M Ziller; H Dorn; K Frick; C Mulert; Y Wuebben; W M Herrmann; R Coppola
Journal:  Clin Neurophysiol       Date:  2000-05       Impact factor: 3.708

7.  Power spectrum analysis of bursting cells in area MT in the behaving monkey.

Authors:  W Bair; C Koch; W Newsome; K Britten
Journal:  J Neurosci       Date:  1994-05       Impact factor: 6.167

8.  Magnetoencephalographic analysis of cortical activity in Alzheimer's disease: a pilot study.

Authors:  H W Berendse; J P Verbunt; P Scheltens; B W van Dijk; E J Jonkman
Journal:  Clin Neurophysiol       Date:  2000-04       Impact factor: 3.708

9.  Dependence of subthalamic nucleus oscillations on movement and dopamine in Parkinson's disease.

Authors:  Ron Levy; Peter Ashby; William D Hutchison; Anthony E Lang; Andres M Lozano; Jonathan O Dostrovsky
Journal:  Brain       Date:  2002-06       Impact factor: 13.501

10.  Quantitative EEG analysis in early onset Alzheimer's disease: a controlled study.

Authors:  U Schreiter-Gasser; T Gasser; P Ziegler
Journal:  Electroencephalogr Clin Neurophysiol       Date:  1993-01
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  4 in total

1.  Introduction to focus issue: rhythms and dynamic transitions in neurological disease: modeling, computation, and experiment.

Authors:  Tasso J Kaper; Mark A Kramer; Horacio G Rotstein
Journal:  Chaos       Date:  2013-12       Impact factor: 3.642

2.  Inferring oscillatory modulation in neural spike trains.

Authors:  Kensuke Arai; Robert E Kass
Journal:  PLoS Comput Biol       Date:  2017-10-06       Impact factor: 4.475

Review 3.  Comparing Open-Source Toolboxes for Processing and Analysis of Spike and Local Field Potentials Data.

Authors:  Valentina A Unakafova; Alexander Gail
Journal:  Front Neuroinform       Date:  2019-07-30       Impact factor: 4.081

4.  A common goodness-of-fit framework for neural population models using marked point process time-rescaling.

Authors:  Long Tao; Karoline E Weber; Kensuke Arai; Uri T Eden
Journal:  J Comput Neurosci       Date:  2018-10-08       Impact factor: 1.621

  4 in total

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