Literature DB >> 20171969

Housekeeping genes; expression levels may change with density of cultured cells.

Samantha Greer1, Rice Honeywell, Mulu Geletu, Rozanne Arulanandam, Leda Raptis.   

Abstract

Western blotting is a powerful technique to characterize a multitude of cellular proteins. As an internal control, the blots are commonly probed for "housekeeping" gene products. In this communication, we show that cell confluence significantly affects the levels of two such widely used proteins, alpha-tubulin and Glyceraldehyde-3-Phosphate Dehydrogenase. On the other hand the levels of heat-shock protein-90 and beta-actin remained unchanged at a wide range of cell densities, making these proteins into more reliable loading controls. Copyright 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20171969     DOI: 10.1016/j.jim.2010.02.006

Source DB:  PubMed          Journal:  J Immunol Methods        ISSN: 0022-1759            Impact factor:   2.303


  47 in total

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Review 2.  Reference genes for measuring mRNA expression.

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3.  Total protein is an effective loading control for cerebrospinal fluid western blots.

Authors:  Mahlon A Collins; Jiyan An; Danielle Peller; Robert Bowser
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4.  Histological evidence: housekeeping genes beta-actin and GAPDH are of limited value for normalization of gene expression.

Authors:  Juntang Lin; Christoph Redies
Journal:  Dev Genes Evol       Date:  2012-10-26       Impact factor: 0.900

5.  Reduced gap junctional communication among astrocytes in experimental diabetes: contributions of altered connexin protein levels and oxidative-nitrosative modifications.

Authors:  Kelly K Ball; Lamia Harik; Gautam K Gandhi; Nancy F Cruz; Gerald A Dienel
Journal:  J Neurosci Res       Date:  2011-05-02       Impact factor: 4.164

6.  Large-scale mapping of mammalian transcriptomes identifies conserved genes associated with different cell states.

Authors:  Yang Yang; Yu-Cheng T Yang; Jiapei Yuan; Zhi John Lu; Jingyi Jessica Li
Journal:  Nucleic Acids Res       Date:  2017-02-28       Impact factor: 16.971

Review 7.  Critical appraisal of quantitative PCR results in colorectal cancer research: can we rely on published qPCR results?

Authors:  J R Dijkstra; L C van Kempen; I D Nagtegaal; S A Bustin
Journal:  Mol Oncol       Date:  2014-01-02       Impact factor: 6.603

8.  V3 stain-free workflow for a practical, convenient, and reliable total protein loading control in western blotting.

Authors:  Anton Posch; Jonathan Kohn; Kenneth Oh; Matt Hammond; Ning Liu
Journal:  J Vis Exp       Date:  2013-12-30       Impact factor: 1.355

9.  Label-free mass spectrometry exploits dozens of detected peptides to quantify lamins in wildtype and knockdown cells.

Authors:  Joe Swift; Takamasa Harada; Amnon Buxboim; Jae-Won Shin; Hsin-Yao Tang; David W Speicher; Dennis E Discher
Journal:  Nucleus       Date:  2013-12-06       Impact factor: 4.197

Review 10.  An old method facing a new challenge: re-visiting housekeeping proteins as internal reference control for neuroscience research.

Authors:  Rena Li; Yong Shen
Journal:  Life Sci       Date:  2013-02-27       Impact factor: 5.037

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