Literature DB >> 20161540

Networks and pathways in pigmentation, health, and disease.

Laura L Baxter1, Stacie K Loftus1, William J Pavan1.   

Abstract

Extensive studies of the biology of the pigment-producing cell (melanocyte) have resulted in a wealth of knowledge regarding the genetics and developmental mechanisms governing skin and hair pigmentation. The ease of identification of altered pigment phenotypes, particularly in mouse coat color mutants, facilitated early use of the pigmentary system in mammalian genetics and development. In addition to the large collection of developmental genetics data, melanocytes are of interest because their malignancy results in melanoma, a highly aggressive and frequently fatal cancer that is increasing in Caucasian populations worldwide. The genetic programs regulating melanocyte development, function, and malignancy are highly complex and only partially understood. Current research in melanocyte development and pigmentation is revealing new genes important in these processes and additional functions for previously known individual components. A detailed understanding of all the components involved in melanocyte development and function, including interactions with neighboring cells and response to environmental stimuli, will be necessary to fully comprehend this complex system. The inherent characteristics of pigmentation biology as well as the resources available to researchers in the pigment cell community make melanocytes an ideal cell type for analysis using systems biology approaches. In this review, the study of melanocyte development and pigmentation is considered as a candidate for systems biology-based analyses.

Entities:  

Keywords:  development; genetics; melanocyte; melanoma; pigmentation

Mesh:

Year:  2009        PMID: 20161540      PMCID: PMC2804986          DOI: 10.1002/wsbm.20

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Syst Biol Med        ISSN: 1939-005X


  115 in total

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5.  Molecular classification of cutaneous malignant melanoma by gene expression profiling.

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6.  Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

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7.  Effects of G-protein mutations on skin color.

Authors:  Catherine D Van Raamsdonk; Karen R Fitch; Helmut Fuchs; Martin Hrabé de Angelis; Gregory S Barsh
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8.  Gpnmb is a melanoblast-expressed, MITF-dependent gene.

Authors:  Stacie K Loftus; Anthony Antonellis; Ivana Matera; Gabriel Renaud; Laura L Baxter; Duncan Reid; Tyra G Wolfsberg; Yidong Chen; Chenwei Wang; Megana K Prasad; Seneca L Bessling; Andrew S McCallion; Eric D Green; Dorothy C Bennett; William J Pavan
Journal:  Pigment Cell Melanoma Res       Date:  2008-11-01       Impact factor: 4.693

9.  The transcriptional landscape of the mammalian genome.

Authors:  P Carninci; T Kasukawa; S Katayama; J Gough; M C Frith; N Maeda; R Oyama; T Ravasi; B Lenhard; C Wells; R Kodzius; K Shimokawa; V B Bajic; S E Brenner; S Batalov; A R R Forrest; M Zavolan; M J Davis; L G Wilming; V Aidinis; J E Allen; A Ambesi-Impiombato; R Apweiler; R N Aturaliya; T L Bailey; M Bansal; L Baxter; K W Beisel; T Bersano; H Bono; A M Chalk; K P Chiu; V Choudhary; A Christoffels; D R Clutterbuck; M L Crowe; E Dalla; B P Dalrymple; B de Bono; G Della Gatta; D di Bernardo; T Down; P Engstrom; M Fagiolini; G Faulkner; C F Fletcher; T Fukushima; M Furuno; S Futaki; M Gariboldi; P Georgii-Hemming; T R Gingeras; T Gojobori; R E Green; S Gustincich; M Harbers; Y Hayashi; T K Hensch; N Hirokawa; D Hill; L Huminiecki; M Iacono; K Ikeo; A Iwama; T Ishikawa; M Jakt; A Kanapin; M Katoh; Y Kawasawa; J Kelso; H Kitamura; H Kitano; G Kollias; S P T Krishnan; A Kruger; S K Kummerfeld; I V Kurochkin; L F Lareau; D Lazarevic; L Lipovich; J Liu; S Liuni; S McWilliam; M Madan Babu; M Madera; L Marchionni; H Matsuda; S Matsuzawa; H Miki; F Mignone; S Miyake; K Morris; S Mottagui-Tabar; N Mulder; N Nakano; H Nakauchi; P Ng; R Nilsson; S Nishiguchi; S Nishikawa; F Nori; O Ohara; Y Okazaki; V Orlando; K C Pang; W J Pavan; G Pavesi; G Pesole; N Petrovsky; S Piazza; J Reed; J F Reid; B Z Ring; M Ringwald; B Rost; Y Ruan; S L Salzberg; A Sandelin; C Schneider; C Schönbach; K Sekiguchi; C A M Semple; S Seno; L Sessa; Y Sheng; Y Shibata; H Shimada; K Shimada; D Silva; B Sinclair; S Sperling; E Stupka; K Sugiura; R Sultana; Y Takenaka; K Taki; K Tammoja; S L Tan; S Tang; M S Taylor; J Tegner; S A Teichmann; H R Ueda; E van Nimwegen; R Verardo; C L Wei; K Yagi; H Yamanishi; E Zabarovsky; S Zhu; A Zimmer; W Hide; C Bult; S M Grimmond; R D Teasdale; E T Liu; V Brusic; J Quackenbush; C Wahlestedt; J S Mattick; D A Hume; C Kai; D Sasaki; Y Tomaru; S Fukuda; M Kanamori-Katayama; M Suzuki; J Aoki; T Arakawa; J Iida; K Imamura; M Itoh; T Kato; H Kawaji; N Kawagashira; T Kawashima; M Kojima; S Kondo; H Konno; K Nakano; N Ninomiya; T Nishio; M Okada; C Plessy; K Shibata; T Shiraki; S Suzuki; M Tagami; K Waki; A Watahiki; Y Okamura-Oho; H Suzuki; J Kawai; Y Hayashizaki
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Authors:  Anthony Antonellis; William R Bennett; Trevelyan R Menheniott; Arjun B Prasad; Shih-Queen Lee-Lin; Eric D Green; Derek Paisley; Robert N Kelsh; William J Pavan; Andrew Ward
Journal:  Hum Mol Genet       Date:  2005-12-05       Impact factor: 6.150

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  10 in total

1.  The effect of a novel frizzled 8-related antiproliferative factor on in vitro carcinoma and melanoma cell proliferation and invasion.

Authors:  Kristopher R Koch; Chen-Ou Zhang; Piotr Kaczmarek; Joseph Barchi; Li Guo; Hanief M Shahjee; Susan Keay
Journal:  Invest New Drugs       Date:  2011-09-20       Impact factor: 3.850

2.  Allele-specific genetic interactions between Mitf and Kit affect melanocyte development.

Authors:  Bin Wen; Yu Chen; Huirong Li; Jing Wang; Jie Shen; Aobo Ma; Jia Qu; Keren Bismuth; Julien Debbache; Heinz Arnheiter; Ling Hou
Journal:  Pigment Cell Melanoma Res       Date:  2010-03-29       Impact factor: 4.693

3.  TFAP2 paralogs facilitate chromatin access for MITF at pigmentation and cell proliferation genes.

Authors:  Colin Kenny; Ramile Dilshat; Hannah E Seberg; Eric Van Otterloo; Gregory Bonde; Annika Helverson; Christopher M Franke; Eiríkur Steingrímsson; Robert A Cornell
Journal:  PLoS Genet       Date:  2022-05-17       Impact factor: 6.020

4.  A curated online resource for SOX10 and pigment cell molecular genetic pathways.

Authors:  Laura L Baxter; R Travis Moreland; Anh-Dao Nguyen; Tyra G Wolfsberg; William J Pavan
Journal:  Database (Oxford)       Date:  2010-10-25       Impact factor: 3.451

5.  Identification of QTL for UV-protective eye area pigmentation in cattle by progeny phenotyping and genome-wide association analysis.

Authors:  Hubert Pausch; Xiaolong Wang; Simone Jung; Dieter Krogmeier; Christian Edel; Reiner Emmerling; Kay-Uwe Götz; Ruedi Fries
Journal:  PLoS One       Date:  2012-05-02       Impact factor: 3.240

6.  A molecular systems approach to modelling human skin pigmentation: identifying underlying pathways and critical components.

Authors:  Arathi Raghunath; Awanti Sambarey; Neha Sharma; Usha Mahadevan; Nagasuma Chandra
Journal:  BMC Res Notes       Date:  2015-04-29

7.  The integrated analysis of RNA-seq and microRNA-seq depicts miRNA-mRNA networks involved in Japanese flounder (Paralichthys olivaceus) albinism.

Authors:  Na Wang; Ruoqing Wang; Renkai Wang; Yongsheng Tian; Changwei Shao; Xiaodong Jia; Songlin Chen
Journal:  PLoS One       Date:  2017-08-04       Impact factor: 3.240

8.  Functional Differentiation of BMP7 Genes in Zebrafish: bmp7a for Dorsal-Ventral Pattern and bmp7b for Melanin Synthesis and Eye Development.

Authors:  Xiao-Ru Dong; Shi-Ming Wan; Jia-Jia Zhou; Chun-Hong Nie; Yu-Long Chen; Jing-Han Diao; Ze-Xia Gao
Journal:  Front Cell Dev Biol       Date:  2022-03-15

9.  Genetic parameters and genome-wide association study of hyperpigmentation of the visceral peritoneum in chickens.

Authors:  Chenglong Luo; Hao Qu; Jie Wang; Yan Wang; Jie Ma; Chunyu Li; Chunfen Yang; Xiaoxiang Hu; Ning Li; Dingming Shu
Journal:  BMC Genomics       Date:  2013-05-16       Impact factor: 3.969

10.  IL-17 and TNF synergistically modulate cytokine expression while suppressing melanogenesis: potential relevance to psoriasis.

Authors:  Claire Q F Wang; Yemsratch T Akalu; Mayte Suarez-Farinas; Juana Gonzalez; Hiroshi Mitsui; Michelle A Lowes; Seth J Orlow; Prashiela Manga; James G Krueger
Journal:  J Invest Dermatol       Date:  2013-04-30       Impact factor: 8.551

  10 in total

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