Literature DB >> 20161536

Fourier method for large scale surface modeling and registration.

Li Shen1, Sungeun Kim, Andrew J Saykin.   

Abstract

Spherical harmonic (SPHARM) description is a powerful Fourier shape modeling method for processing arbitrarily shaped but simply connected 3D objects. As a highly promising method, SPHARM has been widely used in several domains including medical imaging. However, its primary use has been focused on modeling small or moderately-sized surfaces that are relatively smooth, due to challenges related to its applicability, robustness and scalability. This paper presents an enhanced SPHARM framework that addresses these issues and show that the use of SPHARM can expand into broader areas. In particular, we present a simple and efficient Fourier expansion method on the sphere that enables large scale modeling, and propose a new SPHARM registration method that aims to preserve the important homological properties between 3D models. Although SPHARM is a global descriptor, our experimental results show that the proposed SPHARM framework can accurately describe complicated graphics models and highly convoluted 3D surfaces and the proposed registration method allows for effective alignment and registration of these 3D models for further processing or analysis. These methods greatly enable the potential of applying SPHARM to broader areas such as computer graphics, medical imaging, CAD/CAM, bioinformatics, and other related geometric modeling and processing fields.

Entities:  

Year:  2009        PMID: 20161536      PMCID: PMC2802331          DOI: 10.1016/j.cag.2009.03.002

Source DB:  PubMed          Journal:  Comput Graph        ISSN: 0097-8493            Impact factor:   1.936


  9 in total

1.  Protein-ligand recognition using spherical harmonic molecular surfaces: towards a fast and efficient filter for large virtual throughput screening.

Authors:  Wensheng Cai; Xueguang Shao; Bernard Maigret
Journal:  J Mol Graph Model       Date:  2002-01       Impact factor: 2.518

2.  Genus zero surface conformal mapping and its application to brain surface mapping.

Authors:  Xianfeng Gu; Yalin Wang; Tony F Chan; Paul M Thompson; Shing-Tung Yau
Journal:  IEEE Trans Med Imaging       Date:  2004-08       Impact factor: 10.048

3.  Spherical diffusion for 3D surface smoothing.

Authors:  Thomas Bülow
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2004-12       Impact factor: 6.226

4.  Interpolation over arbitrary topology meshes using a two-phase subdivision scheme.

Authors:  Jianmin Zheng; Yiyu Cai
Journal:  IEEE Trans Vis Comput Graph       Date:  2006 May-Jun       Impact factor: 4.579

5.  Non-rigid surface registration using spherical thin-plate splines.

Authors:  Guangyu Zou; Jing Hua; Otto Muzik
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

6.  Weighted fourier series representation and its application to quantifying the amount of gray matter.

Authors:  Moo K Chung; Kim M Dalton; Li Shen; Alan C Evans; Richard J Davidson
Journal:  IEEE Trans Med Imaging       Date:  2007-04       Impact factor: 10.048

7.  The correlated evolution of three-dimensional reproductive structures between male and female damselflies.

Authors:  Mark A McPeek; Li Shen; Hany Farid
Journal:  Evolution       Date:  2008-09-18       Impact factor: 3.694

8.  The tempo and mode of three-dimensional morphological evolution in male reproductive structures.

Authors:  Mark A McPeek; Li Shen; John Z Torrey; Hany Farid
Journal:  Am Nat       Date:  2008-05       Impact factor: 3.926

9.  Modeling three-dimensional morphological structures using spherical harmonics.

Authors:  Li Shen; Hany Farid; Mark A McPeek
Journal:  Evolution       Date:  2009-10-17       Impact factor: 3.694

  9 in total
  3 in total

1.  Predicting anatomical landmarks and bone morphology of the femur using local region matching.

Authors:  Cong-Bo Phan; Seungbum Koo
Journal:  Int J Comput Assist Radiol Surg       Date:  2015-02-12       Impact factor: 2.924

2.  Building a Surface Atlas of Hippocampal Subfields From High Resolution T2-weighted MRI Scans Using Landmark-free Surface Registration.

Authors:  Shan Cong; Maher Rizkalla; Paul Salama; Shannon L Risacher; John D West; Yu-Chien Wu; Liana Apostolova; Eileen Tallman; Andrew J Saykin; Li Shen
Journal:  Conf Proc (Midwest Symp Circuits Syst)       Date:  2017-03-06

3.  3D time series analysis of cell shape using Laplacian approaches.

Authors:  Cheng-Jin Du; Phillip T Hawkins; Len R Stephens; Till Bretschneider
Journal:  BMC Bioinformatics       Date:  2013-10-04       Impact factor: 3.169

  3 in total

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