Literature DB >> 20159167

Susceptibility of different proteins to flow-induced conformational changes monitored with Raman spectroscopy.

Lorna Ashton1, Jonathan Dusting, Eboshogwe Imomoh, Stavroula Balabani, Ewan W Blanch.   

Abstract

By directly monitoring stirred protein solutions with Raman spectroscopy, the reversible unfolding of proteins caused by fluid shear is examined for several natural proteins with varying structural properties and molecular weight. While complete denaturation is not observed, a wide range of spectral variances occur for the different proteins, indicating subtle conformational changes that appear to be protein-specific. A number of significant overall trends are apparent from the study. For globular proteins, the overall extent of spectral variance increases with protein size and the proportion of beta-structure. For two less structured proteins, fetuin and alpha-casein, the observed changes are of relatively low magnitude, despite the greater molecular structural mobility of these proteins. This implies that other protein-specific factors, such as posttranslational modifications, may also be significant. Individual band changes occurring in the spectral profiles of each individual protein are also discussed in detail. Copyright 2010 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Mesh:

Substances:

Year:  2010        PMID: 20159167      PMCID: PMC2820655          DOI: 10.1016/j.bpj.2009.10.010

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  38 in total

1.  Proteolytic processing by matrix metalloproteinases and phosphorylation by protein kinase CK2 of fetuin-A, the major globulin of fetal calf serum.

Authors:  Dieter Kübler; Darko Gosenca; Mathias Wind; Hans Heid; Ilan Friedberg; Willi Jahnen-Dechent; Wolf D Lehmann
Journal:  Biochimie       Date:  2006-11-10       Impact factor: 4.079

2.  Do protein molecules unfold in a simple shear flow?

Authors:  Juan Jaspe; Stephen J Hagen
Journal:  Biophys J       Date:  2006-08-04       Impact factor: 4.033

3.  Tyrosine Raman signatures of the filamentous virus Ff are diagnostic of non-hydrogen-bonded phenoxyls: demonstration by Raman and infrared spectroscopy of p-cresol vapor.

Authors:  Z Arp; D Autrey; J Laane; S A Overman; G J Thomas
Journal:  Biochemistry       Date:  2001-02-27       Impact factor: 3.162

4.  Shear-induced unfolding of lysozyme monitored in situ.

Authors:  Lorna Ashton; Jonathan Dusting; Eboshogwe Imomoh; Stavroula Balabani; Ewan W Blanch
Journal:  Biophys J       Date:  2009-05-20       Impact factor: 4.033

5.  Investigation of polypeptide conformational transitions with two-dimensional Raman optical activity correlation analysis, applying autocorrelation and moving window approaches.

Authors:  L Ashton; E W Blanch
Journal:  Appl Spectrosc       Date:  2008-05       Impact factor: 2.388

6.  Interpretation of the doublet at 850 and 830 cm-1 in the Raman spectra of tyrosyl residues in proteins and certain model compounds.

Authors:  M N Siamwiza; R C Lord; M C Chen; T Takamatsu; I Harada; H Matsuura; T Shimanouchi
Journal:  Biochemistry       Date:  1975-11-04       Impact factor: 3.162

7.  Secondary structure of bovine alpha s1- and beta-casein in solution.

Authors:  L K Creamer; T Richardson; D A Parry
Journal:  Arch Biochem Biophys       Date:  1981-10-15       Impact factor: 4.013

8.  Shear-induced unfolding triggers adhesion of von Willebrand factor fibers.

Authors:  S W Schneider; S Nuschele; A Wixforth; C Gorzelanny; A Alexander-Katz; R R Netz; M F Schneider
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-30       Impact factor: 11.205

9.  Characterization of molten globule state of fetuin at low pH.

Authors:  Farah Naseem; Rizwan Hasan Khan; Soghra Khatun Haq; Aabgeena Naeem
Journal:  Biochim Biophys Acta       Date:  2003-07-30

10.  A simple and direct isolation of whey components from raw milk by gel filtration chromatography and structural characterization by Fourier transform Raman spectroscopy.

Authors:  Mong Liang; Vivin Y T Chen; Hsiu-Ling Chen; Wenlung Chen
Journal:  Talanta       Date:  2006-02-10       Impact factor: 6.057

View more
  7 in total

1.  Rheo-NMR studies of an enzymatic reaction: evidence of a shear-stable macromolecular system.

Authors:  Patrick J B Edwards; Motoko Kakubayashi; Robin Dykstra; Steven M Pascal; Martin A K Williams
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

2.  Detection of receptor-induced glycoprotein conformational changes on enveloped virions by using confocal micro-Raman spectroscopy.

Authors:  Xiaonan Lu; Qian Liu; Javier A Benavides-Montano; Anthony V Nicola; D Eric Aston; Barbara A Rasco; Hector C Aguilar
Journal:  J Virol       Date:  2013-01-02       Impact factor: 5.103

Review 3.  Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis.

Authors:  Phuong H Nguyen; Ayyalusamy Ramamoorthy; Bikash R Sahoo; Jie Zheng; Peter Faller; John E Straub; Laura Dominguez; Joan-Emma Shea; Nikolay V Dokholyan; Alfonso De Simone; Buyong Ma; Ruth Nussinov; Saeed Najafi; Son Tung Ngo; Antoine Loquet; Mara Chiricotto; Pritam Ganguly; James McCarty; Mai Suan Li; Carol Hall; Yiming Wang; Yifat Miller; Simone Melchionna; Birgit Habenstein; Stepan Timr; Jiaxing Chen; Brianna Hnath; Birgit Strodel; Rakez Kayed; Sylvain Lesné; Guanghong Wei; Fabio Sterpone; Andrew J Doig; Philippe Derreumaux
Journal:  Chem Rev       Date:  2021-02-05       Impact factor: 60.622

4.  Detecting protein folding by thermal fluctuations of microcantilevers.

Authors:  Romina Muñoz; Felipe Aguilar-Sandoval; Ludovic Bellon; Francisco Melo
Journal:  PLoS One       Date:  2017-12-21       Impact factor: 3.240

5.  Shear-Induced Amyloid Aggregation in the Brain: V. Are Alzheimer's and Other Amyloid Diseases Initiated in the Lower Brain and Brainstem by Cerebrospinal Fluid Flow Stresses?

Authors:  Conrad N Trumbore
Journal:  J Alzheimers Dis       Date:  2021       Impact factor: 4.472

6.  Shear-Induced Amyloid Formation in the Brain: II. An Experimental System for Monitoring Amyloid Shear Processes and Investigating Potential Spinal Tap Problems.

Authors:  Conrad N Trumbore
Journal:  J Alzheimers Dis       Date:  2017       Impact factor: 4.472

7.  Shear-Induced Amyloid Formation in the Brain: III. The Roles of Shear Energy and Seeding in a Proposed Shear Model.

Authors:  Conrad N Trumbore
Journal:  J Alzheimers Dis       Date:  2018       Impact factor: 4.472

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.