Literature DB >> 20157337

Regulation of the replication cycle: conserved and diverse regulatory systems for DnaA and oriC.

Tsutomu Katayama1, Shogo Ozaki, Kenji Keyamura, Kazuyuki Fujimitsu.   

Abstract

Chromosomal replication must be limited to once and only once per cell cycle. This is accomplished by multiple regulatory pathways that govern initiator proteins and replication origins. A principal feature of DNA replication is the coupling of the replication reaction to negative-feedback regulation. Some of the factors that are important in this process have been discovered, including the clamp (DNA polymerase III subunit-beta (DnaN)), the datA locus, SeqA, DnaA homologue protein (Hda) and YabA, as well as factors that are involved at other stages of the regulatory mechanism, such as DnaA initiator-associating protein (DiaA), the DnaA-reactivating sequence (DARS) loci and Soj. Here, we describe the regulation of DnaA, one of the central proteins involved in bacterial DNA replication, by these factors in Escherichia coli, Bacillus subtilis and Caulobacter crescentus.

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Year:  2010        PMID: 20157337     DOI: 10.1038/nrmicro2314

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  105 in total

1.  The assembly and migration of SeqA-Gfp fusion in living cells of Escherichia coli.

Authors:  T Onogi; H Niki; M Yamazoe; S Hiraga
Journal:  Mol Microbiol       Date:  1999-03       Impact factor: 3.501

2.  Crystal structure of a SeqA-N filament: implications for DNA replication and chromosome organization.

Authors:  Alba Guarné; Therese Brendler; Qinghai Zhao; Rodolfo Ghirlando; Stuart Austin; Wei Yang
Journal:  EMBO J       Date:  2005-03-31       Impact factor: 11.598

3.  Structure of a sliding clamp on DNA.

Authors:  Roxana E Georgescu; Seung-Sup Kim; Olga Yurieva; John Kuriyan; Xiang-Peng Kong; Mike O'Donnell
Journal:  Cell       Date:  2008-01-11       Impact factor: 41.582

4.  The conserved sporulation protein YneE inhibits DNA replication in Bacillus subtilis.

Authors:  Lilah Rahn-Lee; Boris Gorbatyuk; Ole Skovgaard; Richard Losick
Journal:  J Bacteriol       Date:  2009-03-27       Impact factor: 3.490

5.  Dynamic control of the DNA replication initiation protein DnaA by Soj/ParA.

Authors:  Heath Murray; Jeff Errington
Journal:  Cell       Date:  2008-10-03       Impact factor: 41.582

6.  A mechanism for cell cycle regulation of sporulation initiation in Bacillus subtilis.

Authors:  Jan-Willem Veening; Heath Murray; Jeff Errington
Journal:  Genes Dev       Date:  2009-08-15       Impact factor: 11.361

7.  The box VII motif of Escherichia coli DnaA protein is required for DnaA oligomerization at the E. coli replication origin.

Authors:  Magdalena M Felczak; Jon M Kaguni
Journal:  J Biol Chem       Date:  2004-09-14       Impact factor: 5.157

Review 8.  Control of DNA replication licensing in a cell cycle.

Authors:  Hideo Nishitani; Zoi Lygerou
Journal:  Genes Cells       Date:  2002-06       Impact factor: 1.891

9.  YabA of Bacillus subtilis controls DnaA-mediated replication initiation but not the transcriptional response to replication stress.

Authors:  Alexi I Goranov; Adam M Breier; Houra Merrikh; Alan D Grossman
Journal:  Mol Microbiol       Date:  2009-09-08       Impact factor: 3.501

10.  DnaAcos hyperinitiates by circumventing regulatory pathways that control the frequency of initiation in Escherichia coli.

Authors:  Magdalena M Felczak; Jon M Kaguni
Journal:  Mol Microbiol       Date:  2009-04-30       Impact factor: 3.501

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  139 in total

1.  Soj/ParA stalls DNA replication by inhibiting helix formation of the initiator protein DnaA.

Authors:  Graham Scholefield; Jeff Errington; Heath Murray
Journal:  EMBO J       Date:  2012-01-27       Impact factor: 11.598

2.  Cellular microbiology: Replication comes in all sizes.

Authors:  Lucie Wootton
Journal:  Nat Rev Microbiol       Date:  2012-05       Impact factor: 60.633

3.  The rcbA gene product reduces spontaneous and induced chromosome breaks in Escherichia coli.

Authors:  Magdalena M Felczak; Jon M Kaguni
Journal:  J Bacteriol       Date:  2012-02-17       Impact factor: 3.490

4.  Primosomal proteins DnaD and DnaB are recruited to chromosomal regions bound by DnaA in Bacillus subtilis.

Authors:  Wiep Klaas Smits; Houra Merrikh; Carla Yaneth Bonilla; Alan D Grossman
Journal:  J Bacteriol       Date:  2010-11-19       Impact factor: 3.490

Review 5.  Folded DNA in action: hairpin formation and biological functions in prokaryotes.

Authors:  David Bikard; Céline Loot; Zeynep Baharoglu; Didier Mazel
Journal:  Microbiol Mol Biol Rev       Date:  2010-12       Impact factor: 11.056

Review 6.  DNA motifs that sculpt the bacterial chromosome.

Authors:  Fabrice Touzain; Marie-Agnès Petit; Sophie Schbath; Meriem El Karoui
Journal:  Nat Rev Microbiol       Date:  2011-01       Impact factor: 60.633

7.  A vast collection of microbial genes that are toxic to bacteria.

Authors:  Aya Kimelman; Asaf Levy; Hila Sberro; Shahar Kidron; Azita Leavitt; Gil Amitai; Deborah R Yoder-Himes; Omri Wurtzel; Yiwen Zhu; Edward M Rubin; Rotem Sorek
Journal:  Genome Res       Date:  2012-02-01       Impact factor: 9.043

8.  Diversification of DnaA dependency for DNA replication in cyanobacterial evolution.

Authors:  Ryudo Ohbayashi; Satoru Watanabe; Shigeki Ehira; Yu Kanesaki; Taku Chibazakura; Hirofumi Yoshikawa
Journal:  ISME J       Date:  2015-10-30       Impact factor: 10.302

9.  Exploring the roles of DNA methylation in the metal-reducing bacterium Shewanella oneidensis MR-1.

Authors:  Matthew L Bendall; Khai Luong; Kelly M Wetmore; Matthew Blow; Jonas Korlach; Adam Deutschbauer; Rex R Malmstrom
Journal:  J Bacteriol       Date:  2013-08-30       Impact factor: 3.490

10.  DNA gyrase activity regulates DnaA-dependent replication initiation in Bacillus subtilis.

Authors:  A N Samadpour; H Merrikh
Journal:  Mol Microbiol       Date:  2018-03-06       Impact factor: 3.501

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