Literature DB >> 20153743

Development and validation of a comprehensive mutation and deletion detection assay for SDHB, SDHC, and SDHD.

Dragana Milosevic1, Patrick Lundquist, Kendall Cradic, Noemi Vidal-Folch, ThanhTruc Huynh, Karel Pacak, Stefan K G Grebe.   

Abstract

BACKGROUND: Lack of sequencing validation and complexity of deletion testing hinder genetic diagnosis of SDH-associated paraganglioma/pheochromocytoma.
METHODS: We developed sequencing assays and multiplex ligation-dependent probe amplification (MLPA) deletion detection for SDHB, SDHC and SDHD. Clinical performance was validated on 141 blinded samples, previously tested at NIH.
RESULTS: Sequencing and deletion detection were highly reproducible and agreed with previous NIH results in 99.3% and 100%, respectively.
CONCLUSIONS: DNA sequencing combined with MLPA allows reliable and simplified genotyping of SDHB, SDHC and SDHD. 2010 The Canadian Society of Clinical Chemists. Published by Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20153743      PMCID: PMC3419008          DOI: 10.1016/j.clinbiochem.2010.01.016

Source DB:  PubMed          Journal:  Clin Biochem        ISSN: 0009-9120            Impact factor:   3.281


  9 in total

1.  Editorial: paraganglioma--all in the family.

Authors:  William F Young; Abbie L Abboud
Journal:  J Clin Endocrinol Metab       Date:  2006-03       Impact factor: 5.958

2.  Mediastinal paragangliomas: association with mutations in the succinate dehydrogenase genes and aggressive behavior.

Authors:  Hans K Ghayee; Bas Havekes; Eleonora P M Corssmit; Graeme Eisenhofer; Stephen R Hammes; Zahid Ahmad; Alexander Tessnow; Ivica Lazúrová; Karen T Adams; Antonio T Fojo; Karel Pacak; Richard J Auchus
Journal:  Endocr Relat Cancer       Date:  2008-12-15       Impact factor: 5.678

3.  Mutations in the SDHB gene are associated with extra-adrenal and/or malignant phaeochromocytomas.

Authors:  Anne-Paule Gimenez-Roqueplo; Judith Favier; Pierre Rustin; Claudine Rieubland; Malvina Crespin; Valérie Nau; Philippe Khau Van Kien; Pierre Corvol; Pierre-François Plouin; Xavier Jeunemaitre
Journal:  Cancer Res       Date:  2003-09-01       Impact factor: 12.701

4.  The approach to the patient with paraganglioma.

Authors:  Hartmut P H Neumann; Charis Eng
Journal:  J Clin Endocrinol Metab       Date:  2009-08       Impact factor: 5.958

Review 5.  Pheochromocytoma: the expanding genetic differential diagnosis.

Authors:  Jennifer Bryant; Jennifer Farmer; Lisa J Kessler; Raymond R Townsend; Katherine L Nathanson
Journal:  J Natl Cancer Inst       Date:  2003-08-20       Impact factor: 13.506

Review 6.  Malignant pheochromocytoma: current status and initiatives for future progress.

Authors:  Graeme Eisenhofer; Stefan R Bornstein; Frederieke M Brouwers; Nai-Kong V Cheung; Patricia L Dahia; Ronald R de Krijger; Thomas J Giordano; Lloyd A Greene; David S Goldstein; Hendrik Lehnert; William M Manger; John M Maris; Hartmut P H Neumann; Karel Pacak; Barry L Shulkin; David I Smith; Arthur S Tischler; William F Young
Journal:  Endocr Relat Cancer       Date:  2004-09       Impact factor: 5.678

Review 7.  Clinical aspects of SDHx-related pheochromocytoma and paraganglioma.

Authors:  Henri J L M Timmers; Anne-Paule Gimenez-Roqueplo; Massimo Mannelli; Karel Pacak
Journal:  Endocr Relat Cancer       Date:  2009-02-03       Impact factor: 5.678

8.  High frequency of germline succinate dehydrogenase mutations in sporadic cervical paragangliomas in northern Spain: mitochondrial succinate dehydrogenase structure-function relationships and clinical-pathological correlations.

Authors:  Jorge Lima; Tália Feijão; André Ferreira da Silva; Isabel Pereira-Castro; Gregorio Fernandez-Ballester; Valdemar Máximo; Agustin Herrero; Luis Serrano; Manuel Sobrinho-Simões; Ginesa Garcia-Rostan
Journal:  J Clin Endocrinol Metab       Date:  2007-09-11       Impact factor: 5.958

9.  Mutation analysis of SDHB and SDHC: novel germline mutations in sporadic head and neck paraganglioma and familial paraganglioma and/or pheochromocytoma.

Authors:  Jean-Pierre Bayley; Ivonne van Minderhout; Marjan M Weiss; Jeroen C Jansen; Peter H N Oomen; Fred H Menko; Barbara Pasini; Barbara Ferrando; Nora Wong; Lesley C Alpert; Rosie Williams; Edward Blair; Peter Devilee; Peter E M Taschner
Journal:  BMC Med Genet       Date:  2006-01-11       Impact factor: 2.103

  9 in total
  3 in total

1.  Metastatic sympathetic paraganglioma in a patient with loss of the SDHC gene.

Authors:  Thereasa Rich; Michelle Jackson; Alejandro Roman-Gonzalez; Komal Shah; Gilbert J Cote; Camilo Jimenez
Journal:  Fam Cancer       Date:  2015-07-11       Impact factor: 2.375

2.  CHARACTERISTICS AND OUTCOMES OF METASTATIC SDHB AND SPORADIC PHEOCHROMOCYTOMA/PARAGANGLIOMA: AN NATIONAL INSTITUTES OF HEALTH STUDY.

Authors:  Hana Turkova; Tamara Prodanov; Marek Maly; Victoria Martucci; Karen Adams; Jiri Widimsky; Clara C Chen; Alexander Ling; Electron Kebebew; Constantine A Stratakis; Tito Fojo; Karel Pacak
Journal:  Endocr Pract       Date:  2015-11-02       Impact factor: 3.443

3.  Genome-wide analysis reveals recurrent structural abnormalities of TP63 and other p53-related genes in peripheral T-cell lymphomas.

Authors:  George Vasmatzis; Sarah H Johnson; Ryan A Knudson; Rhett P Ketterling; Esteban Braggio; Rafael Fonseca; David S Viswanatha; Mark E Law; N Sertac Kip; Nazan Ozsan; Stefan K Grebe; Lori A Frederick; Bruce W Eckloff; E Aubrey Thompson; Marshall E Kadin; Dragana Milosevic; Julie C Porcher; Yan W Asmann; David I Smith; Irina V Kovtun; Stephen M Ansell; Ahmet Dogan; Andrew L Feldman
Journal:  Blood       Date:  2012-08-01       Impact factor: 22.113

  3 in total

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