Literature DB >> 20151696

Electrokinetic concentration of DNA polymers in nanofluidic channels.

Derek Stein1, Zeno Deurvorst, Frank H J van der Heyden, Wiepke J A Koopmans, Alan Gabel, Cees Dekker.   

Abstract

DNA molecules can be concentrated in a narrow region of a nanochannel when driven electrokinetically in submillimolar salt solutions. Transport experiments and theoretical modeling reveal the interplay of electrophoresis, electro-osmosis, and the unique statistical properties of confined polymers that lead to DNA aggregation. A finite conductance through the bulk of the device also plays a crucial role by influencing the electric fields in the nanochannel. We build on this understanding by demonstrating how a nanofluidic device with integrated electrodes can preconcentrate DNA at selected locations and at physiological salt concentrations that are relevant to lab-on-a-chip applications.

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Year:  2010        PMID: 20151696     DOI: 10.1021/nl902228p

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  16 in total

1.  On-chip DNA preconcentration in different media conductivities by electrodeless dielectrophoresis.

Authors:  Shunbo Li; Ziran Ye; Yu Sanna Hui; Yibo Gao; Yusheng Jiang; Weijia Wen
Journal:  Biomicrofluidics       Date:  2015-09-30       Impact factor: 2.800

2.  Presentation of large DNA molecules for analysis as nanoconfined dumbbells.

Authors:  Kristy L Kounovsky-Shafer; Juan P Hernández-Ortiz; Kyubong Jo; Theo Odijk; Juan J de Pablo; David C Schwartz
Journal:  Macromolecules       Date:  2013-10-22       Impact factor: 5.985

3.  Two-dimensional enzyme diffusion in laterally confined DNA monolayers.

Authors:  Matteo Castronovo; Agnese Lucesoli; Pietro Parisse; Anastasia Kurnikova; Aseem Malhotra; Mario Grassi; Gabriele Grassi; Bruna Scaggiante; Loredana Casalis; Giacinto Scoles
Journal:  Nat Commun       Date:  2011       Impact factor: 14.919

4.  Studying DNA translocation in nanocapillaries using single molecule fluorescence.

Authors:  Vivek V Thacker; Sandip Ghosal; Silvia Hernández-Ainsa; Nicholas A W Bell; Ulrich F Keyser
Journal:  Appl Phys Lett       Date:  2012-11-30       Impact factor: 3.791

5.  Review article: Fabrication of nanofluidic devices.

Authors:  Chuanhua Duan; Wei Wang; Quan Xie
Journal:  Biomicrofluidics       Date:  2013-03-13       Impact factor: 2.800

6.  DNA translocation through short nanofluidic channels under asymmetric pulsed electric field.

Authors:  C Gupta; W-C Liao; D Gallego-Perez; C E Castro; L J Lee
Journal:  Biomicrofluidics       Date:  2014-04-16       Impact factor: 2.800

7.  Enhanced discrimination of DNA molecules in nanofluidic channels through multiple measurements.

Authors:  Yi-Heng Sen; Tarun Jain; Carlos A Aguilar; Rohit Karnik
Journal:  Lab Chip       Date:  2012-02-02       Impact factor: 6.799

8.  Optofluidic in situ maskless lithography of charge selective nanoporous hydrogel for DNA preconcentration.

Authors:  Hyoki Kim; Junhoi Kim; Eun-Geun Kim; Austen James Heinz; Sunghoon Kwon; Honggu Chun
Journal:  Biomicrofluidics       Date:  2010-12-30       Impact factor: 2.800

9.  Hydrodynamic flow in the vicinity of a nanopore induced by an applied voltage.

Authors:  Mao Mao; Sandip Ghosal; Guohui Hu
Journal:  Nanotechnology       Date:  2013-05-20       Impact factor: 3.874

10.  Nucleic Acid Isolation and Enrichment on a Microchip.

Authors:  Jinho Kim; John P Hilton; Kyung A Yang; Renjun Pei; Milan Stojanovic; Qiao Lin
Journal:  Sens Actuators A Phys       Date:  2013-06-01       Impact factor: 3.407

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