Literature DB >> 20148587

Dynamics of 1,3-dipolar cycloadditions: energy partitioning of reactants and quantitation of synchronicity.

Lai Xu1, Charles E Doubleday, K N Houk.   

Abstract

The dynamics of 1,3-dipolar cycloadditions of nine 1,3-dipoles with ethylene and acetylene have been explored by quasiclassical trajectory and single trajectory calculations in the retro-cycloaddition direction to compute energy partitioning of reactants among relative translation, vibration, and rotation. The results are interpreted with an expanded version of Polanyi's Rules for bimolecular reactions, and three trends are evident. (1) Relative translation of reactants is the main contributor to surmounting the barrier, since all transition states (TSs) are early with respect to sigma bond formation. (2) Vibrational excitation in the 1,3-dipole bending modes required for reaction is related to the lateness of the TS with respect to dipole bending: diazonium betaines (late TS, dipole bending required) > nitrilium betaines > azomethine betaines (early TS, dipole bending least important). This is also the order of the activation barriers (high --> low). (3) The previously reported linear correlation between activation barriers and the energy required to distort reactants to their TS geometries are understandable in terms of the requirements for vibrational excitation computed here. For the 1,3-dipolar cycloadditions, single trajectory calculations, which contain no zero point vibrational energy, give reasonable estimates of the mean energy partitioning of reactants derived from potential energy barrier release. The timing of bond formation and relative reactivities of different 1,3-dipoles are discussed.

Entities:  

Year:  2010        PMID: 20148587     DOI: 10.1021/ja909372f

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  12 in total

1.  Dynamics, transition states, and timing of bond formation in Diels-Alder reactions.

Authors:  Kersey Black; Peng Liu; Lai Xu; Charles Doubleday; Kendall N Houk
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-02       Impact factor: 11.205

2.  Conceptual DFT analysis of the regioselectivity of 1,3-dipolar cycloadditions: nitrones as a case of study.

Authors:  Ramón Alain Miranda-Quintana; Marco Martínez González; David Hernández-Castillo; Luis A Montero-Cabrera; Paul W Ayers; Christophe Morell
Journal:  J Mol Model       Date:  2017-07-22       Impact factor: 1.810

3.  Perspectives on the reaction force constant.

Authors:  Peter Politzer; Jane S Murray; Pablo Jaque
Journal:  J Mol Model       Date:  2013-01-05       Impact factor: 1.810

4.  Controlling Selectivity by Controlling Energy Partitioning in a Thermal Reaction in Solution.

Authors:  Hiroaki Kurouchi; Ivonne L Andujar-De Sanctis; Daniel A Singleton
Journal:  J Am Chem Soc       Date:  2016-10-27       Impact factor: 15.419

5.  Entropic intermediates and hidden rate-limiting steps in seemingly concerted cycloadditions. Observation, prediction, and origin of an isotope effect on recrossing.

Authors:  Ollie M Gonzalez-James; Eugene E Kwan; Daniel A Singleton
Journal:  J Am Chem Soc       Date:  2012-01-18       Impact factor: 15.419

6.  Microscopic progression in the free radical addition reaction: modeling, geometry, energy, and kinetics.

Authors:  Yun Zhang; Hong Huang; Zhiling Liang; Houhe Liu; Ling Yi; Jinhong Zhang; Zhiqiang Zhang; Cheng Zhong; Yugang Huang; Guodong Ye
Journal:  J Mol Model       Date:  2017-02-15       Impact factor: 1.810

7.  Exploring the maximum Fukui function sites with the frontier-controlled soft-soft reactions using 1,3-dipolar cycloaddition reactions of nitrilium betaines.

Authors:  Alejandro Morales-Bayuelo; Jesús Sánchez-Márquez
Journal:  J Mol Model       Date:  2022-04-09       Impact factor: 1.810

8.  Mimicry of the proton wire mechanism of enzymes inside a supramolecular capsule enables β-selective O-glycosylations.

Authors:  Tian-Ren Li; Fabian Huck; GiovanniMaria Piccini; Konrad Tiefenbacher
Journal:  Nat Chem       Date:  2022-07-07       Impact factor: 24.274

9.  Modulation of inherent dynamical tendencies of the bisabolyl cation via preorganization in epi-isozizaene synthase.

Authors:  Ryan P Pemberton; Krystina C Ho; Dean J Tantillo
Journal:  Chem Sci       Date:  2015-02-02       Impact factor: 9.825

10.  Mechanisms and Dynamics of Synthetic and Biosynthetic Formation of Delitschiapyrones: Solvent Control of Ambimodal Periselectivity.

Authors:  Yike Zou; K N Houk
Journal:  J Am Chem Soc       Date:  2021-07-23       Impact factor: 16.383

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.