Literature DB >> 20147642

Multicenter external quality assessment of molecular methods for detection of human herpesvirus 6.

P J de Pagter1, R Schuurman, N M de Vos, W Mackay, A M van Loon.   

Abstract

The purpose of this study was to evaluate the performance of laboratories for the detection and quantification of human herpesvirus 6 (HHV-6) by an external quality assessment (EQA) evaluation. The HHV-6 EQA panel consisted of eight samples containing various concentrations of HHV-6 type A (strain GS) or type B (strain Z29), two samples containing other herpesviruses (i.e., human cytomegalovirus [HCMV] and Epstein-Barr virus [EBV]), and two HHV-6-negative samples. Panel samples were prepared in human plasma, heat inactivated, and lyophilized. Panel distribution, data management, and analysis were coordinated by Quality Control for Molecular Diagnostics (QCMD), Glasgow, United Kingdom. Fifty-one laboratories participated and submitted 57 data sets. Eleven (19.3%) data sets were generated using conventional in-house assays, 11 (19.3%) data sets using commercial real-time PCR assays, and 35 (61.4%) data sets using in-house real-time PCR assays. The presence of HHV-6 DNA at viral loads exceeding 6,000 copies/ml was detected by all participants, and over 80% of the participants still reported correct qualitative results for the sample containing just over 200 copies/ml. The false-positivity rate was 1.8% for both the negative samples and the samples containing HCMV or EBV DNA. The majority (23/33; 69.7%) of quantitative data sets were generated using in-house real-time PCR assays. The standard deviations of the geometric means of the samples ranged from 0.5 to 0.7 log(10). The results of this first international EQA demonstrate encouraging analytical sensitivity for the detection of HHV-6-DNA in human plasma, although we observed extensive interlaboratory variation of quantitative HHV-6 DNA results. Standardization needs to be improved to allow further elucidation of the clinical significance of HHV-6 loads.

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Year:  2010        PMID: 20147642      PMCID: PMC2897485          DOI: 10.1128/JCM.01145-09

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  11 in total

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Authors:  J Ruell; C Barnes; K Mutton; B Foulkes; J Chang; J Cavet; M Guiver; L Menasce; M Dougal; R Chopra
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Review 2.  Human herpesvirus 6 and central nervous system disease in hematopoietic cell transplantation.

Authors:  Danielle M Zerr
Journal:  J Clin Virol       Date:  2006-12       Impact factor: 3.168

3.  Human herpesvirus 6 infection inhibits specific lymphocyte proliferation responses and is related to lymphocytopenia after allogeneic stem cell transplantation.

Authors:  F Z Wang; A Linde; H Dahl; P Ljungman
Journal:  Bone Marrow Transplant       Date:  1999-12       Impact factor: 5.483

4.  European proficiency testing program for molecular detection and quantitation of hepatitis B virus DNA.

Authors:  E Valentine-Thon; A M van Loon; J Schirm; J Reid; P E Klapper; G M Cleator
Journal:  J Clin Microbiol       Date:  2001-12       Impact factor: 5.948

5.  Clinical outcomes of human herpesvirus 6 reactivation after hematopoietic stem cell transplantation.

Authors:  Danielle M Zerr; Lawrence Corey; Hyung W Kim; Meei-Li Huang; Long Nguy; Michael Boeckh
Journal:  Clin Infect Dis       Date:  2005-03-02       Impact factor: 9.079

6.  Persistence of human herpesvirus 6 according to site and variant: possible greater neurotropism of variant A.

Authors:  C B Hall; M T Caserta; K C Schnabel; C Long; L G Epstein; R A Insel; S Dewhurst
Journal:  Clin Infect Dis       Date:  1998-01       Impact factor: 9.079

7.  Seroepidemiology of human herpesvirus 6 infection in normal children and adults.

Authors:  T Okuno; K Takahashi; K Balachandra; K Shiraki; K Yamanishi; M Takahashi; K Baba
Journal:  J Clin Microbiol       Date:  1989-04       Impact factor: 5.948

8.  Prevalence of human herpesvirus 6 variant A and B infections in bone marrow transplant recipients as determined by polymerase chain reaction and sequence-specific oligonucleotide probe hybridization.

Authors:  W R Drobyski; M Eberle; D Majewski; L A Baxter-Lowe
Journal:  J Clin Microbiol       Date:  1993-06       Impact factor: 5.948

9.  Human herpes virus 6 plasma DNA positivity after hematopoietic stem cell transplantation in children: an important risk factor for clinical outcome.

Authors:  P J Anne de Pagter; Rob Schuurman; Henk Visscher; Machiel de Vos; Marc Bierings; Anton M van Loon; Cuno S P M Uiterwaal; Debbie van Baarle; Elisabeth A M Sanders; JaapJan Boelens
Journal:  Biol Blood Marrow Transplant       Date:  2008-07       Impact factor: 5.742

10.  Multicenter comparison of PCR assays for detection of human herpesvirus 6 DNA in serum.

Authors:  Louis Flamand; Annie Gravel; David Boutolleau; Roberto Alvarez-Lafuente; Steve Jacobson; Mauro S Malnati; Debra Kohn; Yi-Wei Tang; Tetsushi Yoshikawa; Dharam Ablashi
Journal:  J Clin Microbiol       Date:  2008-06-11       Impact factor: 5.948

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Authors:  Joshua A Hill
Journal:  Curr Opin Infect Dis       Date:  2019-12       Impact factor: 4.915

2.  External quality assessment for enterovirus 71 and coxsackievirus A16 detection by reverse transcription-PCR using armored RNA as a virus surrogate.

Authors:  Liqiong Song; Shipeng Sun; Bo Li; Yang Pan; Wenli Li; Kuo Zhang; Jinming Li
Journal:  J Clin Microbiol       Date:  2011-08-24       Impact factor: 5.948

3.  Uncertainty in mapping malaria epidemiology: implications for control.

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Journal:  Epidemiol Rev       Date:  2010-06-25       Impact factor: 6.222

Review 4.  Past, present, and future perspectives on the diagnosis of Roseolovirus infections.

Authors:  Joshua A Hill; Ruth Hall Sedlak; Keith R Jerome
Journal:  Curr Opin Virol       Date:  2014-10-14       Impact factor: 7.090

Review 5.  Classification of HHV-6A and HHV-6B as distinct viruses.

Authors:  Dharam Ablashi; Henri Agut; Roberto Alvarez-Lafuente; Duncan A Clark; Stephen Dewhurst; Dario DiLuca; Louis Flamand; Niza Frenkel; Robert Gallo; Ursula A Gompels; Per Höllsberg; Steven Jacobson; Mario Luppi; Paolo Lusso; Mauro Malnati; Peter Medveczky; Yasuko Mori; Philip E Pellett; Joshua C Pritchett; Koichi Yamanishi; Tetsushi Yoshikawa
Journal:  Arch Virol       Date:  2013-11-06       Impact factor: 2.574

6.  Optimisation of a quantitative polymerase chain reaction-based strategy for the detection and quantification of human herpesvirus 6 DNA in patients undergoing allogeneic haematopoietic stem cell transplantation.

Authors:  Miriam Y H Ueda; Paulo G Alvarenga; Juliana M Real; Eloisa de Sá Moreira; Aripuanã Watanabe; Ana Maria Passos-Castilho; Matheus Vescovi; Yana Novis; Vanderson Rocha; Adriana Seber; Jose S R Oliveira; Celso A Rodrigues; Celso F H Granato
Journal:  Mem Inst Oswaldo Cruz       Date:  2015-06-02       Impact factor: 2.743

7.  Human herpesvirus 6B reactivation and delirium are frequent and associated events after cord blood transplantation.

Authors:  J A Hill; M Boeckh; W M Leisenring; H Xie; A L Adler; M-L Huang; J R Fann; C Delaney; D M Zerr
Journal:  Bone Marrow Transplant       Date:  2015-06-29       Impact factor: 5.483

8.  Copy Number Heterogeneity, Large Origin Tandem Repeats, and Interspecies Recombination in Human Herpesvirus 6A (HHV-6A) and HHV-6B Reference Strains.

Authors:  Alexander L Greninger; Pavitra Roychoudhury; Negar Makhsous; Derek Hanson; Jill Chase; Gerhard Krueger; Hong Xie; Meei-Li Huang; Lindsay Saunders; Dharam Ablashi; David M Koelle; Linda Cook; Keith R Jerome
Journal:  J Virol       Date:  2018-04-27       Impact factor: 5.103

9.  Guidelines from the 2017 European Conference on Infections in Leukaemia for management of HHV-6 infection in patients with hematologic malignancies and after hematopoietic stem cell transplantation.

Authors:  Katherine N Ward; Joshua A Hill; Petr Hubacek; Rafael de la Camara; Roberto Crocchiolo; Hermann Einsele; David Navarro; Christine Robin; Catherine Cordonnier; Per Ljungman
Journal:  Haematologica       Date:  2019-08-29       Impact factor: 9.941

Review 10.  Use and Misuse of Cq in qPCR Data Analysis and Reporting.

Authors:  Adrián Ruiz-Villalba; Jan M Ruijter; Maurice J B van den Hoff
Journal:  Life (Basel)       Date:  2021-05-29
  10 in total

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