Literature DB >> 20133629

Catching a protein in the act.

Gerhard Hummer1.   

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Year:  2010        PMID: 20133629      PMCID: PMC2823913          DOI: 10.1073/pnas.0914486107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


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  17 in total

1.  One-dimensional reaction coordinates for diffusive activated rate processes in many dimensions.

Authors:  Alexander Berezhkovskii; Attila Szabo
Journal:  J Chem Phys       Date:  2005-01-01       Impact factor: 3.488

Review 2.  The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding.

Authors:  A R Fersht; A Matouschek; L Serrano
Journal:  J Mol Biol       Date:  1992-04-05       Impact factor: 5.469

3.  Reaction coordinates and rates from transition paths.

Authors:  Robert B Best; Gerhard Hummer
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-06       Impact factor: 11.205

4.  Primary steps of the photoactive yellow protein: isolated chromophore dynamics and protein directed function.

Authors:  I-Ren Lee; Wonchul Lee; Ahmed H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-03       Impact factor: 11.205

5.  Solvent coarse-graining and the string method applied to the hydrophobic collapse of a hydrated chain.

Authors:  Thomas F Miller; Eric Vanden-Eijnden; David Chandler
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-28       Impact factor: 11.205

6.  Experimental determination of upper bound for transition path times in protein folding from single-molecule photon-by-photon trajectories.

Authors:  Hoi Sung Chung; John M Louis; William A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-07       Impact factor: 11.205

7.  Predicting the reaction coordinates of millisecond light-induced conformational changes in photoactive yellow protein.

Authors:  Jocelyne Vreede; Jarek Juraszek; Peter G Bolhuis
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-26       Impact factor: 11.205

8.  Structure at 0.85 A resolution of an early protein photocycle intermediate.

Authors:  U K Genick; S M Soltis; P Kuhn; I L Canestrelli; E D Getzoff
Journal:  Nature       Date:  1998-03-12       Impact factor: 49.962

9.  Photoactivation of the photoactive yellow protein: why photon absorption triggers a trans-to-cis Isomerization of the chromophore in the protein.

Authors:  Gerrit Groenhof; Mathieu Bouxin-Cademartory; Berk Hess; Sam P De Visser; Herman J C Berendsen; Massimo Olivucci; Alan E Mark; Michael A Robb
Journal:  J Am Chem Soc       Date:  2004-04-07       Impact factor: 15.419

10.  Time-resolved resonance raman structural studies of the pB' intermediate in the photocycle of photoactive yellow protein.

Authors:  Duohai Pan; Andrew Philip; Wouter D Hoff; Richard A Mathies
Journal:  Biophys J       Date:  2004-04       Impact factor: 4.033

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  3 in total

1.  Medicinal chemistry for 2020.

Authors:  Seetharama D Satyanarayanajois; Ronald A Hill
Journal:  Future Med Chem       Date:  2011-10       Impact factor: 3.808

2.  Picosecond Photobiology: Watching a Signaling Protein Function in Real Time via Time-Resolved Small- and Wide-Angle X-ray Scattering.

Authors:  Hyun Sun Cho; Friedrich Schotte; Naranbaatar Dashdorj; John Kyndt; Robert Henning; Philip A Anfinrud
Journal:  J Am Chem Soc       Date:  2016-07-05       Impact factor: 15.419

3.  Renormalizing SMD: the renormalization approach and its use in long time simulations and accelerated PMF calculations of macromolecules.

Authors:  Anatoly Dryga; Arieh Warshel
Journal:  J Phys Chem B       Date:  2010-10-07       Impact factor: 2.991

  3 in total

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