Literature DB >> 20133181

Interaction fidelity in two-component signaling.

Hendrik Szurmant1, James A Hoch.   

Abstract

Two component signal transduction systems and phosphorelays have been adapted and amplified by bacteria to respond to a multitude of environmental, metabolic and cell cycle signals while maintaining essentially identical structures for the domains responsible for recognition and phosphotransfer between the sensor histidine kinase and the response regulator. Co-crystal structures of these domains have revealed the variable residues at the interaction surface of the two components responsible for interaction specificity in signal transfer. This information has formed the basis for the development and validation of statistical methods to identify interaction residues and surfaces from compiled databases of interacting proteins and holds forth the promise of determining structures of multi-protein complexes and signaling networks. Copyright 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20133181      PMCID: PMC2847666          DOI: 10.1016/j.mib.2010.01.007

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  44 in total

1.  Mutual information without the influence of phylogeny or entropy dramatically improves residue contact prediction.

Authors:  S D Dunn; L M Wahl; G B Gloor
Journal:  Bioinformatics       Date:  2007-12-05       Impact factor: 6.937

2.  Identification of direct residue contacts in protein-protein interaction by message passing.

Authors:  Martin Weigt; Robert A White; Hendrik Szurmant; James A Hoch; Terence Hwa
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-30       Impact factor: 11.205

3.  Rewiring the specificity of two-component signal transduction systems.

Authors:  Jeffrey M Skerker; Barrett S Perchuk; Albert Siryaporn; Emma A Lubin; Orr Ashenberg; Mark Goulian; Michael T Laub
Journal:  Cell       Date:  2008-06-13       Impact factor: 41.582

4.  Co-evolving motions at protein-protein interfaces of two-component signaling systems identified by covariance analysis.

Authors:  Hendrik Szurmant; Benjamin G Bobay; Robert A White; Daniel M Sullivan; Richele J Thompson; Terence Hwa; James A Hoch; John Cavanagh
Journal:  Biochemistry       Date:  2008-06-28       Impact factor: 3.162

5.  Structural insight into partner specificity and phosphoryl transfer in two-component signal transduction.

Authors:  Patricia Casino; Vicente Rubio; Alberto Marina
Journal:  Cell       Date:  2009-10-01       Impact factor: 41.582

6.  Structure of PAS-linked histidine kinase and the response regulator complex.

Authors:  Seiji Yamada; Hiroshi Sugimoto; Miki Kobayashi; Ayako Ohno; Hiro Nakamura; Yoshitsugu Shiro
Journal:  Structure       Date:  2009-10-14       Impact factor: 5.006

7.  Biological insights from structures of two-component proteins.

Authors:  Rong Gao; Ann M Stock
Journal:  Annu Rev Microbiol       Date:  2009       Impact factor: 15.500

8.  Bacitracin sensing in Bacillus subtilis.

Authors:  Eva Rietkötter; Diana Hoyer; Thorsten Mascher
Journal:  Mol Microbiol       Date:  2008-05       Impact factor: 3.501

9.  The MiST2 database: a comprehensive genomics resource on microbial signal transduction.

Authors:  Luke E Ulrich; Igor B Zhulin
Journal:  Nucleic Acids Res       Date:  2009-11-09       Impact factor: 16.971

10.  The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata.

Authors:  Konstantinos Liolios; Konstantinos Mavromatis; Nektarios Tavernarakis; Nikos C Kyrpides
Journal:  Nucleic Acids Res       Date:  2007-11-02       Impact factor: 16.971

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  36 in total

1.  The inner membrane histidine kinase EnvZ senses osmolality via helix-coil transitions in the cytoplasm.

Authors:  Loo Chien Wang; Leslie K Morgan; Pahan Godakumbura; Linda J Kenney; Ganesh S Anand
Journal:  EMBO J       Date:  2012-04-27       Impact factor: 11.598

2.  Conserved mechanism for sensor phosphatase control of two-component signaling revealed in the nitrate sensor NarX.

Authors:  TuAnh Ngoc Huynh; Chris E Noriega; Valley Stewart
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-15       Impact factor: 11.205

3.  Is PhoR-PhoP partner fidelity strict? PhoR is required for the activation of the pho regulon in Streptomyces coelicolor.

Authors:  Lorena T Fernández-Martínez; Fernando Santos-Beneit; Juan F Martín
Journal:  Mol Genet Genomics       Date:  2012-05-30       Impact factor: 3.291

Review 4.  From photon to signal in phytochromes: similarities and differences between prokaryotic and plant phytochromes.

Authors:  Soshichiro Nagano
Journal:  J Plant Res       Date:  2016-01-27       Impact factor: 2.629

5.  Specificity of Subtilin-Mediated Activation of Histidine Kinase SpaK.

Authors:  Christoph Geiger; Tobias Spieß; Sophie Marianne Korn; Peter Kötter; Karl-Dieter Entian
Journal:  Appl Environ Microbiol       Date:  2017-08-31       Impact factor: 4.792

6.  Cytoplasmic sensing by the inner membrane histidine kinase EnvZ.

Authors:  Yong Hwee Foo; Yunfeng Gao; Hongfang Zhang; Linda J Kenney
Journal:  Prog Biophys Mol Biol       Date:  2015-05-01       Impact factor: 3.667

Review 7.  Lessons in Fundamental Mechanisms and Diverse Adaptations from the 2015 Bacterial Locomotion and Signal Transduction Meeting.

Authors:  Birgit M Prüβ; Jun Liu; Penelope I Higgs; Lynmarie K Thompson
Journal:  J Bacteriol       Date:  2015-07-20       Impact factor: 3.490

Review 8.  Stress-induced remodeling of the bacterial proteome.

Authors:  Monica S Guo; Carol A Gross
Journal:  Curr Biol       Date:  2014-05-19       Impact factor: 10.834

9.  Toward rationally redesigning bacterial two-component signaling systems using coevolutionary information.

Authors:  Ryan R Cheng; Faruck Morcos; Herbert Levine; José N Onuchic
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

10.  Nonconserved active site residues modulate CheY autophosphorylation kinetics and phosphodonor preference.

Authors:  Stephanie A Thomas; Robert M Immormino; Robert B Bourret; Ruth E Silversmith
Journal:  Biochemistry       Date:  2013-03-19       Impact factor: 3.162

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