Literature DB >> 20126794

The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156.

Melanie Nack1, Ionela Radu, Michael Gossing, Christian Bamann, Ernst Bamberg, Gabriele Fischer von Mollard, Joachim Heberle.   

Abstract

The light-gated cation channel Channelrhodopsin-2 (ChR2), a retinylidene protein found in the eye-spot of Chlamydomonas reinhardtii, became an optogenetic tool to trigger neurophysiological responses by light and, thus, revolutionized spatio-temporal studies of such processes. The reaction mechanism still remains elusive but recent vibrational spectroscopic experiments started to resolve details of the associated structural changes during the photocycle. Large alterations in the polypeptide backbone were observed by FT-IR spectroscopy that precede and succeed the opening and closing of the channel, respectively. However, the molecular switch that controls gating is still unknown. Here, we present difference spectra of the D156E mutant of ChR2 and assign the observed vibrational bands to crucial hydrogen bonding changes of this residue in various intermediate states of the photoreaction. By comparison with spectra of wild-type ChR2 and the C128T mutant and correlation to electrophysiological studies, we propose the DC gate as a crucial hydrogen-bonding interaction between D156 and C128 which may represent the valve of the channel.

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Year:  2010        PMID: 20126794     DOI: 10.1039/b9pp00157c

Source DB:  PubMed          Journal:  Photochem Photobiol Sci        ISSN: 1474-905X            Impact factor:   3.982


  34 in total

1.  Structural model of channelrhodopsin.

Authors:  Hiroshi C Watanabe; Kai Welke; Franziska Schneider; Satoshi Tsunoda; Feng Zhang; Karl Deisseroth; Peter Hegemann; Marcus Elstner
Journal:  J Biol Chem       Date:  2012-01-11       Impact factor: 5.157

2.  Bioinformatic and mutational analysis of channelrhodopsin-2 protein cation-conducting pathway.

Authors:  Anna Pia Plazzo; Nicola De Franceschi; Francesca Da Broi; Francesco Zonta; Maria Federica Sanasi; Francesco Filippini; Marco Mongillo
Journal:  J Biol Chem       Date:  2011-12-02       Impact factor: 5.157

3.  Tuning the primary reaction of channelrhodopsin-2 by imidazole, pH, and site-specific mutations.

Authors:  Frank Scholz; Ernst Bamberg; Christian Bamann; Josef Wachtveitl
Journal:  Biophys J       Date:  2012-06-05       Impact factor: 4.033

4.  Gating mechanisms of a natural anion channelrhodopsin.

Authors:  Oleg A Sineshchekov; Elena G Govorunova; Hai Li; John L Spudich
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-02       Impact factor: 11.205

5.  Kinetic and vibrational isotope effects of proton transfer reactions in channelrhodopsin-2.

Authors:  Tom Resler; Bernd-Joachim Schultz; Víctor A Lórenz-Fonfría; Ramona Schlesinger; Joachim Heberle
Journal:  Biophys J       Date:  2015-07-21       Impact factor: 4.033

6.  Atomistic Study of Intramolecular Interactions in the Closed-State Channelrhodopsin Chimera, C1C2.

Authors:  Monika R VanGordon; Gaurav Gyawali; Steven W Rick; Susan B Rempe
Journal:  Biophys J       Date:  2017-03-14       Impact factor: 4.033

7.  Spectroscopic study of the transmembrane domain of a rhodopsin-phosphodiesterase fusion protein from a unicellular eukaryote.

Authors:  Masahito Watari; Tatsuya Ikuta; Daichi Yamada; Wataru Shihoya; Kazuho Yoshida; Satoshi P Tsunoda; Osamu Nureki; Hideki Kandori
Journal:  J Biol Chem       Date:  2019-01-08       Impact factor: 5.157

8.  Light-dark adaptation of channelrhodopsin C128T mutant.

Authors:  Eglof Ritter; Patrick Piwowarski; Peter Hegemann; Franz J Bartl
Journal:  J Biol Chem       Date:  2013-02-25       Impact factor: 5.157

9.  Light and pH-induced Changes in Structure and Accessibility of Transmembrane Helix B and Its Immediate Environment in Channelrhodopsin-2.

Authors:  Pierre Volz; Nils Krause; Jens Balke; Constantin Schneider; Maria Walter; Franziska Schneider; Ramona Schlesinger; Ulrike Alexiev
Journal:  J Biol Chem       Date:  2016-06-06       Impact factor: 5.157

Review 10.  Novel optogenetics tool: Gt_CCR4, a light-gated cation channel with high reactivity to weak light.

Authors:  Shoko Hososhima; Shunta Shigemura; Hideki Kandori; Satoshi P Tsunoda
Journal:  Biophys Rev       Date:  2020-03-12
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