Literature DB >> 20117128

Functional dissection of SIRT6: identification of domains that regulate histone deacetylase activity and chromatin localization.

Ruth I Tennen1, Elisabeth Berber, Katrin F Chua.   

Abstract

The mammalian sirtuin SIRT6 is a site-specific histone deacetylase that regulates chromatin structure. SIRT6 is implicated in fundamental biological processes in aging, including maintaining telomere integrity, fine-tuning aging-associated gene expression programs, preventing genomic instability, and maintaining metabolic homeostasis. Despite these important functions, the basic molecular determinants of SIRT6 enzymatic function--including the mechanistic and regulatory roles of specific domains of SIRT6--are not well understood. Sirtuin proteins consist of a conserved central 'sirtuin domain'--thought to comprise an enzymatic core--flanked by variable N- and C-terminal extensions. Here, we report the identification of novel functions for the N- and C-terminal domains of the human SIRT6 protein. We show that the C-terminal extension (CTE) of SIRT6 contributes to proper nuclear localization but is dispensable for enzymatic activity. In contrast, the N-terminal extension (NTE) of SIRT6 is critical for chromatin association and intrinsic catalytic activity. Surprisingly, mutation of a conserved catalytic histidine residue in the core sirtuin domain not only abrogates SIRT6 enzymatic activity but also leads to impaired chromatin association in cells. Together, our observations define important biochemical and cellular roles of specific SIRT6 domains, and provide mechanistic insight into the potential role of these domains as targets for physiologic and pharmacologic modulation. Published by Elsevier Ireland Ltd.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20117128      PMCID: PMC2846990          DOI: 10.1016/j.mad.2010.01.006

Source DB:  PubMed          Journal:  Mech Ageing Dev        ISSN: 0047-6374            Impact factor:   5.432


  34 in total

1.  The silencing protein SIR2 and its homologs are NAD-dependent protein deacetylases.

Authors:  J Landry; A Sutton; S T Tafrov; R C Heller; J Stebbins; L Pillus; R Sternglanz
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-23       Impact factor: 11.205

2.  Locus specificity determinants in the multifunctional yeast silencing protein Sir2.

Authors:  G Cuperus; R Shafaatian; D Shore
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

3.  Ordered nucleation and spreading of silenced chromatin in Saccharomyces cerevisiae.

Authors:  Laura N Rusché; Ann L Kirchmaier; Jasper Rine
Journal:  Mol Biol Cell       Date:  2002-07       Impact factor: 4.138

4.  Phylogenetic classification of prokaryotic and eukaryotic Sir2-like proteins.

Authors:  R A Frye
Journal:  Biochem Biophys Res Commun       Date:  2000-07-05       Impact factor: 3.575

5.  Chromatin association of human origin recognition complex, cdc6, and minichromosome maintenance proteins during the cell cycle: assembly of prereplication complexes in late mitosis.

Authors:  J Méndez; B Stillman
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

6.  A phylogenetically conserved NAD+-dependent protein deacetylase activity in the Sir2 protein family.

Authors:  J S Smith; C B Brachmann; I Celic; M A Kenna; S Muhammad; V J Starai; J L Avalos; J C Escalante-Semerena; C Grubmeyer; C Wolberger; J D Boeke
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

7.  Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase.

Authors:  S Imai; C M Armstrong; M Kaeberlein; L Guarente
Journal:  Nature       Date:  2000-02-17       Impact factor: 49.962

8.  Steps in assembly of silent chromatin in yeast: Sir3-independent binding of a Sir2/Sir4 complex to silencers and role for Sir2-dependent deacetylation.

Authors:  Georg J Hoppe; Jason C Tanny; Adam D Rudner; Scott A Gerber; Sherwin Danaie; Steven P Gygi; Danesh Moazed
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

9.  SIRT6 stabilizes DNA-dependent protein kinase at chromatin for DNA double-strand break repair.

Authors:  Ronald A McCord; Eriko Michishita; Tao Hong; Elisabeth Berber; Lisa D Boxer; Rika Kusumoto; Shenheng Guan; Xiaobing Shi; Or Gozani; Alma L Burlingame; Vilhelm A Bohr; Katrin F Chua
Journal:  Aging (Albany NY)       Date:  2009-01-15       Impact factor: 5.682

10.  The human silent information regulator (Sir)2 homologue hSIRT3 is a mitochondrial nicotinamide adenine dinucleotide-dependent deacetylase.

Authors:  Bjorn Schwer; Brian J North; Roy A Frye; Melanie Ott; Eric Verdin
Journal:  J Cell Biol       Date:  2002-08-19       Impact factor: 10.539

View more
  55 in total

Review 1.  Chromatin regulation and genome maintenance by mammalian SIRT6.

Authors:  Ruth I Tennen; Katrin F Chua
Journal:  Trends Biochem Sci       Date:  2010-08-21       Impact factor: 13.807

2.  The ubiquitin ligase CHIP prevents SirT6 degradation through noncanonical ubiquitination.

Authors:  Sarah M Ronnebaum; Yaxu Wu; Holly McDonough; Cam Patterson
Journal:  Mol Cell Biol       Date:  2013-09-16       Impact factor: 4.272

3.  Structure and biochemical functions of SIRT6.

Authors:  Patricia W Pan; Jessica L Feldman; Mark K Devries; Aiping Dong; Aled M Edwards; John M Denu
Journal:  J Biol Chem       Date:  2011-03-01       Impact factor: 5.157

4.  SIRT6/NF-κB signaling axis in ginsenoside Rg1-delayed hematopoietic stem/progenitor cell senescence.

Authors:  Yan-Long Tang; Yue Zhou; Ya-Ping Wang; Jian-Wei Wang; Ji-Chao Ding
Journal:  Int J Clin Exp Pathol       Date:  2015-05-01

Review 5.  Using mitochondrial sirtuins as drug targets: disease implications and available compounds.

Authors:  Melanie Gertz; Clemens Steegborn
Journal:  Cell Mol Life Sci       Date:  2016-03-23       Impact factor: 9.261

6.  A crucial role of SUMOylation in modulating Sirt6 deacetylation of H3 at lysine 56 and its tumor suppressive activity.

Authors:  J Cai; Y Zuo; T Wang; Y Cao; R Cai; F-L Chen; J Cheng; J Mu
Journal:  Oncogene       Date:  2016-02-22       Impact factor: 9.867

7.  Trichostatin A inhibits deacetylation of histone H3 and p53 by SIRT6.

Authors:  Marci Wood; Stacia Rymarchyk; Song Zheng; Yana Cen
Journal:  Arch Biochem Biophys       Date:  2017-12-09       Impact factor: 4.013

8.  HiPLA: High-throughput imaging proximity ligation assay.

Authors:  Leonid A Serebryannyy; Tom Misteli
Journal:  Methods       Date:  2018-11-10       Impact factor: 3.608

Review 9.  Chromatin and beyond: the multitasking roles for SIRT6.

Authors:  Sita Kugel; Raul Mostoslavsky
Journal:  Trends Biochem Sci       Date:  2014-01-14       Impact factor: 13.807

10.  Sub-cellular localization, expression and functions of Sirt6 during the cell cycle in HeLa cells.

Authors:  Pooneh Memar Ardestani; Fengyi Liang
Journal:  Nucleus       Date:  2012-06-29       Impact factor: 4.197

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.