Literature DB >> 2010917

Influence of proline residues on protein conformation.

M W MacArthur1, J M Thornton.   

Abstract

To study the influence of proline residues on three-dimensional structure, an analysis has been made of all proline residues and their local conformations extracted from the Brookhaven Protein Data bank. We have considered the conformation of the proline itself, the relative occurrence of cis and trans peptides preceding proline residues, the influence of proline on the conformation of the preceding residue and the conformations of various proline patterns (Pro-Pro, Pro-X-Pro, etc.). The results highlight the unique role of proline in determining local conformation.

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Year:  1991        PMID: 2010917     DOI: 10.1016/0022-2836(91)90721-h

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  271 in total

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Authors:  R Golbik; G Fischer; A R Fersht
Journal:  Protein Sci       Date:  1999-07       Impact factor: 6.725

2.  A survey of left-handed polyproline II helices.

Authors:  B J Stapley; T P Creamer
Journal:  Protein Sci       Date:  1999-03       Impact factor: 6.725

3.  An arginine-faced amphipathic alpha helix is required for adenovirus type 5 e4orf6 protein function.

Authors:  J S Orlando; D A Ornelles
Journal:  J Virol       Date:  1999-06       Impact factor: 5.103

4.  Preferred proline puckerings in cis and trans peptide groups: implications for collagen stability.

Authors:  L Vitagliano; R Berisio; A Mastrangelo; L Mazzarella; A Zagari
Journal:  Protein Sci       Date:  2001-12       Impact factor: 6.725

5.  Composites of local structure propensities: evidence for local encoding of long-range structure.

Authors:  David Shortle
Journal:  Protein Sci       Date:  2002-01       Impact factor: 6.725

6.  A sequence and structural study of transmembrane helices.

Authors:  R P Bywater; D Thomas; G Vriend
Journal:  J Comput Aided Mol Des       Date:  2001-06       Impact factor: 3.686

7.  Analysis of the factors that stabilize a designed two-stranded antiparallel beta-sheet.

Authors:  Juan F Espinosa; Faisal A Syud; Samuel H Gellman
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

8.  Crystal structure of a defective folding protein.

Authors:  Frederick A Saul; Michaël Mourez; Brigitte Vulliez-Le Normand; Nathalie Sassoon; Graham A Bentley; Jean-Michel Betton
Journal:  Protein Sci       Date:  2003-03       Impact factor: 6.725

9.  Testing computational prediction of missense mutation phenotypes: functional characterization of 204 mutations of human cystathionine beta synthase.

Authors:  Qiong Wei; Liqun Wang; Qiang Wang; Warren D Kruger; Roland L Dunbrack
Journal:  Proteins       Date:  2010-07

Review 10.  Characterization of the gating brake in the I-II loop of CaV3 T-type calcium channels.

Authors:  Edward Perez-Reyes
Journal:  Channels (Austin)       Date:  2010-11-01       Impact factor: 2.581

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