Literature DB >> 20104356

Reactions of cisplatin with cysteine and methionine at constant pH; a computational study.

Tomás Zimmermann1, Jaroslav V Burda.   

Abstract

Interactions of hydrated cisplatin complexes cis-[Pt(NH(3))(2)Cl(H(2)O)](+) and cis-[Pt(NH(3))(2)(OH)(H(2)O)](+) with cysteine and methionine in an aqueous solution at constant pH were explored using computational methods. Thermodynamic parameters of considered reactions were studied in a broad pH range, taking up to 4 protonation states of each molecule into account. Reaction free energies at constant pH were obtained from standard Gibbs free energies using the Legendre transformation. Solvation free energies and pK(a) values were calculated using the PCM model with UAHF cavities, recently adapted by us for transition metal complexes. The root mean square error of pK(a) values on a set of model platinum complexes and amino acids was equal to 0.74. At pH 7, the transformed Gibbs free energies differ by up to 15 kcal mol(-1) from the Gibbs free energies of model reactions with a constant number of protons. As for cysteine, calculations confirmed a strong preference for kappaS monodenate bonding in a broad pH range. The most stable product of the second reaction step, which proceeds from monodentate to chelate complex, is the kappa(2)S,N coordinated chelate. The reaction with methionine is more complex. In the first step all three considered methionine donor atoms (N, S and O) are thermodynamically preferred products depending on the platinum complex and the pH. This is in accordance with the experimental observation of a pH dependent migration between N and S donor atoms in a chemically related system. The most stable chelates of platinum with methionine are kappa(2)S,N and kappa(2)N,O bonded complexes. The comparison of reaction free energies of both amino acids suggests, that the bidentate methionine ligand can be displaced even by the monodentate cysteine ligand under certain conditions.

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Year:  2009        PMID: 20104356     DOI: 10.1039/b913803j

Source DB:  PubMed          Journal:  Dalton Trans        ISSN: 1477-9226            Impact factor:   4.390


  4 in total

1.  Can Satraplatin be hydrated before the reduction process occurs? The DFT computational study.

Authors:  Ondřej Bradáč; Tomáš Zimmermann; Jaroslav V Burda
Journal:  J Mol Model       Date:  2012-05-30       Impact factor: 1.810

2.  Atomic level rendering of DNA-drug encounter.

Authors:  Maria F Lucas; Israel Cabeza de Vaca; Ryoji Takahashi; Jaime Rubio-Martínez; Víctor Guallar
Journal:  Biophys J       Date:  2014-01-21       Impact factor: 4.033

3.  Formation of chelate structure between His-Met dipeptide and diaqua-cisplatin complex; DFT/PCM computational study.

Authors:  Michal Maixner; Helio F Dos Santos; Jaroslav V Burda
Journal:  J Biol Inorg Chem       Date:  2018-02-08       Impact factor: 3.358

Review 4.  Advances in Our Understanding of the Molecular Mechanisms of Action of Cisplatin in Cancer Therapy.

Authors:  Paul B Tchounwou; Shaloam Dasari; Felicite K Noubissi; Paresh Ray; Sanjay Kumar
Journal:  J Exp Pharmacol       Date:  2021-03-18
  4 in total

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