Literature DB >> 20097738

The transposon impala is activated by low temperatures: use of a controlled transposition system to identify genes critical for viability of Aspergillus fumigatus.

Paul D Carr1, Danny Tuckwell, Peter M Hey, Laurence Simon, Christophe d'Enfert, Mike Birch, Jason D Oliver, Michael J Bromley.   

Abstract

Genes that are essential for viability represent potential targets for the development of anti-infective agents. However, relatively few have been determined in the filamentous fungal pathogen Aspergillus fumigatus. A novel solution employing parasexual genetics coupled with transposon mutagenesis using the Fusarium oxysporum transposon impala had previously enabled the identification of 20 essential genes from A. fumigatus; however, further use of this system required a better understanding of the mode of action of the transposon itself. Examination of a range of conditions indicated that impala is activated by prolonged exposure to low temperatures. This newly identified property was then harnessed to identify 96 loci that are critical for viability in A. fumigatus, including genes required for RNA metabolism, organelle organization, protein transport, ribosome biogenesis, and transcription, as well as a number of noncoding RNAs. A number of these genes represent potential targets for much-needed novel antifungal drugs.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20097738      PMCID: PMC2837977          DOI: 10.1128/EC.00324-09

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN: 1535-9786


  50 in total

1.  A new mathematical model for relative quantification in real-time RT-PCR.

Authors:  M W Pfaffl
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

Review 2.  The evolutionary dynamics of eukaryotic gene order.

Authors:  Laurence D Hurst; Csaba Pál; Martin J Lercher
Journal:  Nat Rev Genet       Date:  2004-04       Impact factor: 53.242

3.  Cholorate toxicity in Aspergillus nidulans: the selection and characterisation of chlorate resistant mutants.

Authors:  D J Cove
Journal:  Heredity (Edinb)       Date:  1976-04       Impact factor: 3.821

4.  Identification of essential genes in the human fungal pathogen Aspergillus fumigatus by transposon mutagenesis.

Authors:  Arnaud Firon; François Villalba; Roland Beffa; Christophe D'Enfert
Journal:  Eukaryot Cell       Date:  2003-04

5.  Effect of temperature on translocation frequency of the Tn3 element.

Authors:  P J Kretschmer; S N Cohen
Journal:  J Bacteriol       Date:  1979-08       Impact factor: 3.490

6.  Impala, a transposon from Fusarium oxysporum, is active in the genome of Penicillium griseoroseum.

Authors:  Marisa Vieira de Queiroz; Marie Josée Daboussi
Journal:  FEMS Microbiol Lett       Date:  2003-01-28       Impact factor: 2.742

7.  Highly efficient gene replacements in Neurospora strains deficient for nonhomologous end-joining.

Authors:  Yuuko Ninomiya; Keiichiro Suzuki; Chizu Ishii; Hirokazu Inoue
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-06       Impact factor: 11.205

8.  Functional profiling of the Saccharomyces cerevisiae genome.

Authors:  Guri Giaever; Angela M Chu; Li Ni; Carla Connelly; Linda Riles; Steeve Véronneau; Sally Dow; Ankuta Lucau-Danila; Keith Anderson; Bruno André; Adam P Arkin; Anna Astromoff; Mohamed El-Bakkoury; Rhonda Bangham; Rocio Benito; Sophie Brachat; Stefano Campanaro; Matt Curtiss; Karen Davis; Adam Deutschbauer; Karl-Dieter Entian; Patrick Flaherty; Francoise Foury; David J Garfinkel; Mark Gerstein; Deanna Gotte; Ulrich Güldener; Johannes H Hegemann; Svenja Hempel; Zelek Herman; Daniel F Jaramillo; Diane E Kelly; Steven L Kelly; Peter Kötter; Darlene LaBonte; David C Lamb; Ning Lan; Hong Liang; Hong Liao; Lucy Liu; Chuanyun Luo; Marc Lussier; Rong Mao; Patrice Menard; Siew Loon Ooi; Jose L Revuelta; Christopher J Roberts; Matthias Rose; Petra Ross-Macdonald; Bart Scherens; Greg Schimmack; Brenda Shafer; Daniel D Shoemaker; Sharon Sookhai-Mahadeo; Reginald K Storms; Jeffrey N Strathern; Giorgio Valle; Marleen Voet; Guido Volckaert; Ching-yun Wang; Teresa R Ward; Julie Wilhelmy; Elizabeth A Winzeler; Yonghong Yang; Grace Yen; Elaine Youngman; Kexin Yu; Howard Bussey; Jef D Boeke; Michael Snyder; Peter Philippsen; Ronald W Davis; Mark Johnston
Journal:  Nature       Date:  2002-07-25       Impact factor: 49.962

9.  Large-scale essential gene identification in Candida albicans and applications to antifungal drug discovery.

Authors:  Terry Roemer; Bo Jiang; John Davison; Troy Ketela; Karynn Veillette; Anouk Breton; Fatou Tandia; Annie Linteau; Susan Sillaots; Catarina Marta; Nick Martel; Steeve Veronneau; Sebastien Lemieux; Sarah Kauffman; Jeff Becker; Reginald Storms; Charles Boone; Howard Bussey
Journal:  Mol Microbiol       Date:  2003-10       Impact factor: 3.501

10.  CADRE: the Central Aspergillus Data REpository.

Authors:  J E Mabey; M J Anderson; P F Giles; C J Miller; T K Attwood; N W Paton; E Bornberg-Bauer; G D Robson; S G Oliver; D W Denning
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

View more
  17 in total

1.  Characterization of transcriptional activation and inserted-into-gene preference of various transposable elements in the Brassica species.

Authors:  Caihua Gao; Meili Xiao; Lingyan Jiang; Jiana Li; Jiaming Yin; Xiaodong Ren; Wei Qian; Ortegón Oscar; Donghui Fu; Zhanglin Tang
Journal:  Mol Biol Rep       Date:  2012-02-11       Impact factor: 2.316

2.  In vivo veritas: Aspergillus fumigatus proliferation and pathogenesis--conditionally speaking.

Authors:  Robert A Cramer
Journal:  Virulence       Date:  2016       Impact factor: 5.882

3.  Inducible Cell Fusion Permits Use of Competitive Fitness Profiling in the Human Pathogenic Fungus Aspergillus fumigatus.

Authors:  Darel Macdonald; Darren D Thomson; Anna Johns; Adriana Contreras Valenzuela; Jane M Gilsenan; Kathryn M Lord; Paul Bowyer; David W Denning; Nick D Read; Michael J Bromley
Journal:  Antimicrob Agents Chemother       Date:  2018-12-21       Impact factor: 5.191

4.  Transposition of the miniature inverted-repeat transposable element mimp1 in the wheat pathogen Fusarium culmorum.

Authors:  Francesca Spanu; Matias Pasquali; Barbara Scherm; Virgilio Balmas; Angela Marcello; Giuseppe Ortu; Marie Dufresne; Lucien Hoffmann; Marie-Josée Daboussi; Quirico Migheli
Journal:  Mol Plant Pathol       Date:  2012-08-16       Impact factor: 5.663

5.  Long Terminal Repeat Retrotransposon Afut4 Promotes Azole Resistance of Aspergillus fumigatus by Enhancing the Expression of sac1 Gene.

Authors:  Mandong Hu; Zongwei Li; Dingchen Li; Jingya Zhao; Yong Chen; Zelei Wang; Fangyan Chen; Li Han
Journal:  Antimicrob Agents Chemother       Date:  2021-09-13       Impact factor: 5.191

6.  Transposon insertion mutation of Antarctic psychrotrophic fungus for red pigment production adaptive to normal temperature.

Authors:  Lulu Ding; Hezhou Huang; Fengning Lu; Jian Lu; Xiangshan Zhou; Yuanxing Zhang; Menghao Cai
Journal:  J Ind Microbiol Biotechnol       Date:  2022-01-20       Impact factor: 4.258

Review 7.  Structure-guided approaches to targeting stress responses in human fungal pathogens.

Authors:  Emmanuelle V LeBlanc; Elizabeth J Polvi; Amanda O Veri; Gilbert G Privé; Leah E Cowen
Journal:  J Biol Chem       Date:  2020-08-12       Impact factor: 5.157

8.  Fluorescence Polarization-Based Measurement of Protein-Ligand Interaction in Fungal Cell Lysates.

Authors:  Emmanuelle V LeBlanc; Tanvi Shekhar-Guturja; Luke Whitesell; Leah E Cowen
Journal:  Curr Protoc       Date:  2021-01

9.  Transposable Elements Contribute to Genome Dynamics and Gene Expression Variation in the Fungal Plant Pathogen Verticillium dahliae.

Authors:  David E Torres; Bart P H J Thomma; Michael F Seidl
Journal:  Genome Biol Evol       Date:  2021-07-06       Impact factor: 3.416

Review 10.  Advances in fungal chemical genomics for the discovery of new antifungal agents.

Authors:  Alice Xue; Nicole Robbins; Leah E Cowen
Journal:  Ann N Y Acad Sci       Date:  2020-08-28       Impact factor: 6.499

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.