Literature DB >> 20094791

Phylogeny and taxonomy of Chlorobiaceae.

Johannes F Imhoff1, Vera Thiel.   

Abstract

Based on phylogenetic relationships found according to gene sequences of the 16S rRNA and the FMO (Fenna-Matthews-Olson protein) genes, and supported by the G + C content of the DNA and sequence signatures, the strains and species of green sulfur bacteria have been grouped into a phylogenetic system. Since properties used previously for classification such as cell morphology, photosynthetic pigments and substrate utilization do not conform with their phylogeny, a reassignment of strains to species, and a rearrangement among the species were necessary. The comparison of the traditional classification system of these bacteria with their phylogenetic relationship yielded a confusing picture. As a consequence of this rearrangement, species of the green sulfur bacteria were classified into the genera Chlorobium, Chlorobaculum, Prosthecochloris, and Chloroherpeton. Strains were assigned to the species according to their phylogenetic similarity and a number of new combinations, and new species were defined. New isolates and also environmental gene sequences fit very well into the established groups or may form new species, some of which have been described and others are awaiting their description. New strains and available gene sequences are included into the phylogenetic system, and a taxonomic classification on the species level is proposed.

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Mesh:

Year:  2010        PMID: 20094791     DOI: 10.1007/s11120-009-9510-7

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  28 in total

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Journal:  Biochemistry       Date:  2002-03-05       Impact factor: 3.162

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Journal:  Photosynth Res       Date:  2002       Impact factor: 3.573

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10.  Ignavibacterium album gen. nov., sp. nov., a moderately thermophilic anaerobic bacterium isolated from microbial mats at a terrestrial hot spring and proposal of Ignavibacteria classis nov., for a novel lineage at the periphery of green sulfur bacteria.

Authors:  Takao Iino; Koji Mori; Yoshihito Uchino; Tatsunori Nakagawa; Shigeaki Harayama; Ken-Ichiro Suzuki
Journal:  Int J Syst Evol Microbiol       Date:  2009-08-11       Impact factor: 2.747

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  16 in total

1.  In vitro synthesis and characterization of bacteriochlorophyll-f and its absence in bacteriochlorophyll-e producing organisms.

Authors:  Hitoshi Tamiaki; Jun Komada; Michio Kunieda; Kazuhiro Fukai; Taichi Yoshitomi; Jiro Harada; Tadashi Mizoguchi
Journal:  Photosynth Res       Date:  2010-12-15       Impact factor: 3.573

2.  Light-dependent sulfide oxidation in the anoxic zone of the Chesapeake Bay can be explained by small populations of phototrophic bacteria.

Authors:  Alyssa J Findlay; Alexa J Bennett; Thomas E Hanson; George W Luther
Journal:  Appl Environ Microbiol       Date:  2015-08-21       Impact factor: 4.792

3.  Chlorobaculum tepidum TLS displays a complex transcriptional response to sulfide addition.

Authors:  Brian J Eddie; Thomas E Hanson
Journal:  J Bacteriol       Date:  2012-11-16       Impact factor: 3.490

4.  Both forward and reverse TCA cycles operate in green sulfur bacteria.

Authors:  Kuo-Hsiang Tang; Robert E Blankenship
Journal:  J Biol Chem       Date:  2010-07-22       Impact factor: 5.157

5.  'Candidatus Thermochlorobacter aerophilum:' an aerobic chlorophotoheterotrophic member of the phylum Chlorobi defined by metagenomics and metatranscriptomics.

Authors:  Zhenfeng Liu; Christian G Klatt; Marcus Ludwig; Douglas B Rusch; Sheila I Jensen; Michael Kühl; David M Ward; Donald A Bryant
Journal:  ISME J       Date:  2012-03-29       Impact factor: 10.302

6.  Freshwater Chlorobia Exhibit Metabolic Specialization among Cosmopolitan and Endemic Populations.

Authors:  Sarahi L Garcia; Maliheh Mehrshad; Moritz Buck; Jackson M Tsuji; Josh D Neufeld; Katherine D McMahon; Stefan Bertilsson; Chris Greening; Sari Peura
Journal:  mSystems       Date:  2021-05-11       Impact factor: 6.496

7.  Gene expression system in green sulfur bacteria by conjugative plasmid transfer.

Authors:  Chihiro Azai; Jiro Harada; Oh-oka Hirozo
Journal:  PLoS One       Date:  2013-11-27       Impact factor: 3.240

Review 8.  Phototrophic sulfide oxidation: environmental insights and a method for kinetic analysis.

Authors:  Thomas E Hanson; George W Luther; Alyssa J Findlay; Daniel J Macdonald; Daniel Hess
Journal:  Front Microbiol       Date:  2013-12-19       Impact factor: 5.640

Review 9.  Anoxygenic Photosynthesis in Photolithotrophic Sulfur Bacteria and Their Role in Detoxication of Hydrogen Sulfide.

Authors:  Ivan Kushkevych; Veronika Bosáková; Monika Vítězová; Simon K-M R Rittmann
Journal:  Antioxidants (Basel)       Date:  2021-05-22

10.  Lowbush wild blueberries have the potential to modify gut microbiota and xenobiotic metabolism in the rat colon.

Authors:  Alison Lacombe; Robert W Li; Dorothy Klimis-Zacas; Aleksandra S Kristo; Shravani Tadepalli; Emily Krauss; Ryan Young; Vivian C H Wu
Journal:  PLoS One       Date:  2013-06-28       Impact factor: 3.240

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