Literature DB >> 20090974

Solution-state 2D NMR of ball-milled plant cell wall gels in DMSO-d(6)/pyridine-d(5).

Hoon Kim1, John Ralph.   

Abstract

NMR fingerprinting of the components of finely divided plant cell walls swelled in DMSO has been recently described. Cell wall gels, produced directly in the NMR tube with perdeutero-dimethylsulfoxide, allowed the acquisition of well resolved/dispersed 2D (13)C-(1)H correlated solution-state NMR spectra of the entire array of wall polymers, without the need for component fractionation. That is, without actual solubilization, and without apparent structural modification beyond that inflicted by the ball milling and ultrasonication steps, satisfactorily interpretable spectra can be acquired that reveal compositional and structural details regarding the polysaccharide and lignin components in the wall. Here, the profiling method has been improved by using a mixture of perdeuterated DMSO and pyridine (4 : 1, v/v). Adding pyridine provided not only easier sample handling because of the better mobility compared to the DMSO-d(6)-only system but also considerably elevated intensities and improved resolution of the NMR spectra due to the enhanced swelling of the cell walls. This modification therefore provides a more rapid method for comparative structural evaluation of plant cell walls than is currently available. We examined loblolly pine (Pinus taeda, a gymnosperm), aspen (Populus tremuloides, an angiosperm), kenaf (Hibiscus cannabinus, an herbaceous plant), and corn (Zea mays L., a grass, i.e., from the Poaceae family). In principle, lignin composition (notably, the syringyl : guaiacyl : p-hydroxyphenyl ratio) can be quantified without the need for lignin isolation. Correlations for p-coumarate units in the corn sample are readily seen, and a variety of the ferulate correlations are also well resolved; ferulates are important components responsible for cell wall cross-linking in grasses. Polysaccharide anomeric correlations were tentatively assigned for each plant sample based on standard samples and various literature data. With the new potential for chemometric analysis using the 2D NMR fingerprint, this gel-state method may provide the basis for an attractive approach to providing a secondary screen for selecting biomass lines and for optimizing biomass processing and conversion efficiencies.

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Year:  2009        PMID: 20090974      PMCID: PMC4070321          DOI: 10.1039/b916070a

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  54 in total

1.  Differential localization of arabinan and galactan side chains of rhamnogalacturonan 1 in cambial derivatives.

Authors:  F F Ermel; M L Follet-Gueye; C Cibert; B Vian; C Morvan; A M Catesson; R Goldberg
Journal:  Planta       Date:  2000-04       Impact factor: 4.116

2.  Mild acetolysis and NMR studies of the D-mannan of Saccharomyces cerevisiae X2180-1A wild-type strain.

Authors:  H Kobayashi; N Shibata; M Watanabe; M Komido; N Hashimoto; K Hisamichi; S Suzuki
Journal:  Carbohydr Res       Date:  1992-07-02       Impact factor: 2.104

3.  Preliminary evidence for sinapyl acetate as a lignin monomer in kenaf.

Authors:  Fachuang Lu; John Ralph
Journal:  Chem Commun (Camb)       Date:  2002-01-07       Impact factor: 6.222

4.  Compensated adiabatic inversion pulses: broadband INEPT and HSQC.

Authors:  Eriks Kupce; Ray Freeman
Journal:  J Magn Reson       Date:  2007-05-17       Impact factor: 2.229

5.  13C assignments of the carbon atoms in the aromatic rings of lignin model compounds of the arylglycerol beta-aryl ether type.

Authors:  Michel Bardet; Knut Lundquist; Jim Parkås; Danielle Robert; Sverker von Unge
Journal:  Magn Reson Chem       Date:  2006-10       Impact factor: 2.447

6.  O-Acetylation of plant cell wall polysaccharides: identification and partial characterization of a rhamnogalacturonan O-acetyl-transferase from potato suspension-cultured cells.

Authors:  M Pauly; H V Scheller
Journal:  Planta       Date:  2000-03       Impact factor: 4.116

7.  Bonding of hydroxycinnamic acids to lignin: ferulic and p-coumaric acids are predominantly linked at the benzyl position of lignin, not the beta-position, in grass cell walls.

Authors:  T B Lam; K Kadoya; K Iiyama
Journal:  Phytochemistry       Date:  2001-07       Impact factor: 4.072

8.  An arabinogalactan from the skin of Opuntia ficus-indica prickly pear fruits.

Authors:  Youssef Habibi; Mostafa Mahrouz; Marie-France Marais; Michel R Vignon
Journal:  Carbohydr Res       Date:  2004-04-28       Impact factor: 2.104

9.  Coniferyl ferulate incorporation into lignin enhances the alkaline delignification and enzymatic degradation of cell walls.

Authors:  John H Grabber; Ronald D Hatfield; Fachuang Lu; John Ralph
Journal:  Biomacromolecules       Date:  2008-08-20       Impact factor: 6.988

10.  Simple chemical transformation of lignocellulosic biomass into furans for fuels and chemicals.

Authors:  Joseph B Binder; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2009-02-11       Impact factor: 15.419

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  114 in total

1.  Lignin biosynthesis and structure.

Authors:  Ruben Vanholme; Brecht Demedts; Kris Morreel; John Ralph; Wout Boerjan
Journal:  Plant Physiol       Date:  2010-05-14       Impact factor: 8.340

2.  A polymer of caffeyl alcohol in plant seeds.

Authors:  Fang Chen; Yuki Tobimatsu; Daphna Havkin-Frenkel; Richard A Dixon; John Ralph
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-17       Impact factor: 11.205

Review 3.  Supramolecular Hydrogelators and Hydrogels: From Soft Matter to Molecular Biomaterials.

Authors:  Xuewen Du; Jie Zhou; Junfeng Shi; Bing Xu
Journal:  Chem Rev       Date:  2015-12-08       Impact factor: 60.622

4.  Lignin composition and structure in young versus adult Eucalyptus globulus plants.

Authors:  Jorge Rencoret; Ana Gutiérrez; Lidia Nieto; J Jiménez-Barbero; Craig B Faulds; Hoon Kim; John Ralph; Angel T Martínez; José C Del Río
Journal:  Plant Physiol       Date:  2010-11-23       Impact factor: 8.340

5.  13C Tracking after 13CO2 Supply Revealed Diurnal Patterns of Wood Formation in Aspen.

Authors:  Amir Mahboubi; Pernilla Linden; Mattias Hedenström; Thomas Moritz; Totte Niittylä
Journal:  Plant Physiol       Date:  2015-04-30       Impact factor: 8.340

6.  Substrate-Specific Development of Thermophilic Bacterial Consortia by Using Chemically Pretreated Switchgrass.

Authors:  Stephanie A Eichorst; Chijioke Joshua; Noppadon Sathitsuksanoh; Seema Singh; Blake A Simmons; Steven W Singer
Journal:  Appl Environ Microbiol       Date:  2014-09-26       Impact factor: 4.792

7.  Lignocellulose pretreatment in a fungus-cultivating termite.

Authors:  Hongjie Li; Daniel J Yelle; Chang Li; Mengyi Yang; Jing Ke; Ruijuan Zhang; Yu Liu; Na Zhu; Shiyou Liang; Xiaochang Mo; John Ralph; Cameron R Currie; Jianchu Mo
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-19       Impact factor: 11.205

8.  Compensatory Guaiacyl Lignin Biosynthesis at the Expense of Syringyl Lignin in 4CL1-Knockout Poplar.

Authors:  Chung-Jui Tsai; Peng Xu; Liang-Jiao Xue; Hao Hu; Batbayar Nyamdari; Radnaa Naran; Xiaohong Zhou; Geert Goeminne; Ruili Gao; Erica Gjersing; Joseph Dahlen; Sivakumar Pattathil; Michael G Hahn; Mark F Davis; John Ralph; Wout Boerjan; Scott A Harding
Journal:  Plant Physiol       Date:  2020-03-05       Impact factor: 8.340

9.  Whole plant cell wall characterization using solution-state 2D NMR.

Authors:  Shawn D Mansfield; Hoon Kim; Fachuang Lu; John Ralph
Journal:  Nat Protoc       Date:  2012-08-02       Impact factor: 13.491

10.  Commelinid Monocotyledon Lignins Are Acylated by p-Coumarate.

Authors:  Steven D Karlen; Heather C A Free; Dharshana Padmakshan; Bronwen G Smith; John Ralph; Philip J Harris
Journal:  Plant Physiol       Date:  2018-05-03       Impact factor: 8.340

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