Literature DB >> 20080950

Error-free replicative bypass of (6-4) photoproducts by DNA polymerase zeta in mouse and human cells.

Jung-Hoon Yoon1, Louise Prakash, Satya Prakash.   

Abstract

The ultraviolet (UV)-induced (6-4) pyrimidine-pyrimidone photoproduct [(6-4) PP] confers a large structural distortion in DNA. Here we examine in human cells the roles of translesion synthesis (TLS) DNA polymerases (Pols) in promoting replication through a (6-4) TT photoproduct carried on a duplex plasmid where bidirectional replication initiates from an origin of replication. We show that TLS contributes to a large fraction of lesion bypass and that it is mostly error-free. We find that, whereas Pol eta and Pol iota provide alternate pathways for mutagenic TLS, surprisingly, Pol zeta functions independently of these Pols and in a predominantly error-free manner. We verify and extend these observations in mouse cells and conclude that, in human cells, TLS during replication can be markedly error-free even opposite a highly distorting DNA lesion.

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Year:  2010        PMID: 20080950      PMCID: PMC2807347          DOI: 10.1101/gad.1872810

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  20 in total

1.  Role of DNA polymerase eta in the bypass of a (6-4) TT photoproduct.

Authors:  R E Johnson; L Haracska; S Prakash; L Prakash
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

2.  The solution structure of DNA duplex-decamer containing the (6-4) photoproduct of thymidylyl(3'-->5')thymidine by NMR and relaxation matrix refinement.

Authors:  J K Kim; B S Choi
Journal:  Eur J Biochem       Date:  1995-03-15

3.  1H NMR study of the exchangeable protons of the duplex d(GCGTTGCG).d(CGCAACGC) containing a thymine photodimer.

Authors:  J Kemmink; R Boelens; T Koning; G A van der Marel; J H van Boom; R Kaptein
Journal:  Nucleic Acids Res       Date:  1987-06-11       Impact factor: 16.971

4.  Cyclobutane pyrimidine dimers are responsible for the vast majority of mutations induced by UVB irradiation in mammalian cells.

Authors:  Y H You; D H Lee; J H Yoon; S Nakajima; A Yasui; G P Pfeifer
Journal:  J Biol Chem       Date:  2001-09-25       Impact factor: 5.157

5.  Initiation of simian virus 40 DNA synthesis in vitro.

Authors:  P A Bullock; Y S Seo; J Hurwitz
Journal:  Mol Cell Biol       Date:  1991-05       Impact factor: 4.272

6.  Origin and direction of simian virus 40 deoxyribonucleic acid replication.

Authors:  G C Fareed; G F Garon; N P Salzman
Journal:  J Virol       Date:  1972-09       Impact factor: 5.103

7.  Bidirectional replication of Simian Virus 40 DNA.

Authors:  K J Danna; D Nathans
Journal:  Proc Natl Acad Sci U S A       Date:  1972-11       Impact factor: 11.205

8.  Lesion bypass in yeast cells: Pol eta participates in a multi-DNA polymerase process.

Authors:  Anne Bresson; Robert P P Fuchs
Journal:  EMBO J       Date:  2002-07-15       Impact factor: 11.598

9.  Simian virus 40 DNA replication in vitro: specificity of initiation and evidence for bidirectional replication.

Authors:  J J Li; T J Kelly
Journal:  Mol Cell Biol       Date:  1985-06       Impact factor: 4.272

10.  Contrasting structural impacts induced by cis-syn cyclobutane dimer and (6-4) adduct in DNA duplex decamers: implication in mutagenesis and repair activity.

Authors:  J K Kim; D Patel; B S Choi
Journal:  Photochem Photobiol       Date:  1995-07       Impact factor: 3.421

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  45 in total

1.  PrimPol breaks replication barriers.

Authors:  Thomas Helleday
Journal:  Nat Struct Mol Biol       Date:  2013-12       Impact factor: 15.369

2.  Error-Prone Replication through UV Lesions by DNA Polymerase θ Protects against Skin Cancers.

Authors:  Jung-Hoon Yoon; Mark J McArthur; Jeseong Park; Debashree Basu; Maki Wakamiya; Louise Prakash; Satya Prakash
Journal:  Cell       Date:  2019-02-14       Impact factor: 41.582

Review 3.  Translesion DNA synthesis and mutagenesis in eukaryotes.

Authors:  Julian E Sale
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-03-01       Impact factor: 10.005

4.  Chronology in lesion tolerance gives priority to genetic variability.

Authors:  Karel Naiman; Gaëlle Philippin; Robert P Fuchs; Vincent Pagès
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-28       Impact factor: 11.205

5.  Genetic evidence for reconfiguration of DNA polymerase θ active site for error-free translesion synthesis in human cells.

Authors:  Jung-Hoon Yoon; Robert E Johnson; Louise Prakash; Satya Prakash
Journal:  J Biol Chem       Date:  2020-03-13       Impact factor: 5.157

6.  Genetic control of predominantly error-free replication through an acrolein-derived minor-groove DNA adduct.

Authors:  Jung-Hoon Yoon; Richard P Hodge; Linda C Hackfeld; Jeseong Park; Jayati Roy Choudhury; Satya Prakash; Louise Prakash
Journal:  J Biol Chem       Date:  2018-01-12       Impact factor: 5.157

7.  Dual role for mammalian DNA polymerase ζ in maintaining genome stability and proliferative responses.

Authors:  Sabine S Lange; Ella Bedford; Shelley Reh; John P Wittschieben; Steve Carbajal; Donna F Kusewitt; John DiGiovanni; Richard D Wood
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-05       Impact factor: 11.205

8.  Genomic assay reveals tolerance of DNA damage by both translesion DNA synthesis and homology-dependent repair in mammalian cells.

Authors:  Lior Izhar; Omer Ziv; Isadora S Cohen; Nicholas E Geacintov; Zvi Livneh
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-25       Impact factor: 11.205

9.  Rev1, Rev3, or Rev7 siRNA Abolishes Ultraviolet Light-Induced Translesion Replication in HeLa Cells: A Comprehensive Study Using Alkaline Sucrose Density Gradient Sedimentation.

Authors:  Jun Takezawa; Yukio Ishimi; Naomi Aiba; Kouichi Yamada
Journal:  J Nucleic Acids       Date:  2010-12-01

10.  A nuclear family A DNA polymerase from Entamoeba histolytica bypasses thymine glycol.

Authors:  Guillermo Pastor-Palacios; Elisa Azuara-Liceaga; Luis G Brieba
Journal:  PLoS Negl Trop Dis       Date:  2010-08-10
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