Literature DB >> 20080102

Comparative analysis of membrane-associated fusion peptide secondary structure and lipid mixing function of HIV gp41 constructs that model the early pre-hairpin intermediate and final hairpin conformations.

Kelly Sackett1, Matthew J Nethercott, Raquel F Epand, Richard M Epand, Douglas R Kindra, Yechiel Shai, David P Weliky.   

Abstract

Fusion between viral and host cell membranes is the initial step of human immunodeficiency virus infection and is mediated by the gp41 protein, which is embedded in the viral membrane. The approximately 20-residue N-terminal fusion peptide (FP) region of gp41 binds to the host cell membrane and plays a critical role in fusion catalysis. Key gp41 fusion conformations include an early pre-hairpin intermediate (PHI) characterized by extended coiled-coil structure in the region C-terminal of the FP and a final hairpin state with compact six-helix bundle structure. The large "N70" (gp41 1-70) and "FP-Hairpin" constructs of the present study contained the FP and respectively modeled the PHI and hairpin conformations. Comparison was also made to the shorter "FP34" (gp41 1-34) fragment. Studies were done in membranes with physiologically relevant cholesterol content and in membranes without cholesterol. In either membrane type, there were large differences in fusion function among the constructs with little fusion induced by FP-Hairpin, moderate fusion for FP34, and very rapid fusion for N70. Overall, our findings support acceleration of gp41-induced membrane fusion by early PHI conformation and fusion arrest after folding to the final six-helix bundle structure. FP secondary structure at Leu7 of the membrane-associated constructs was probed by solid-state nuclear magnetic resonance and showed populations of molecules with either beta-sheet or helical structure with greater beta-sheet population observed for FP34 than for N70 or FP-Hairpin. The large differences in fusion function among the constructs were not obviously correlated with FP secondary structure. Observation of cholesterol-dependent FP structure for fusogenic FP34 and N70 and cholesterol-independent structure for non-fusogenic FP-Hairpin was consistent with membrane insertion of the FP for FP34 and N70 and with lack of insertion for FP-Hairpin. Membrane insertion of the FP may therefore be associated with the early PHI conformation and FP withdrawal with the final hairpin conformation. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20080102      PMCID: PMC2830311          DOI: 10.1016/j.jmb.2010.01.018

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  43 in total

Review 1.  HIV entry inhibitors targeting gp41: from polypeptides to small-molecule compounds.

Authors:  Shuwen Liu; Shuguang Wu; Shibo Jiang
Journal:  Curr Pharm Des       Date:  2007       Impact factor: 3.116

Review 2.  Structures and mechanisms of viral membrane fusion proteins: multiple variations on a common theme.

Authors:  Judith M White; Sue E Delos; Matthew Brecher; Kathryn Schornberg
Journal:  Crit Rev Biochem Mol Biol       Date:  2008 May-Jun       Impact factor: 8.250

3.  Solid-state NMR spectroscopy of human immunodeficiency virus fusion peptides associated with host-cell-like membranes: 2D correlation spectra and distance measurements support a fully extended conformation and models for specific antiparallel strand registries.

Authors:  Wei Qiang; Michele L Bodner; David P Weliky
Journal:  J Am Chem Soc       Date:  2008-03-28       Impact factor: 15.419

4.  HIV fusion peptide and its cross-linked oligomers: efficient syntheses, significance of the trimer in fusion activity, correlation of beta strand conformation with membrane cholesterol, and proximity to lipid headgroups.

Authors:  Wei Qiang; David P Weliky
Journal:  Biochemistry       Date:  2009-01-20       Impact factor: 3.162

5.  Fatty acids can substitute the HIV fusion peptide in lipid merging and fusion: an analogy between viral and palmitoylated eukaryotic fusion proteins.

Authors:  Naama Lev; Yechiel Shai
Journal:  J Mol Biol       Date:  2007-09-11       Impact factor: 5.469

6.  Hairpin folding of HIV gp41 abrogates lipid mixing function at physiologic pH and inhibits lipid mixing by exposed gp41 constructs.

Authors:  Kelly Sackett; Matthew J Nethercott; Yechiel Shai; David P Weliky
Journal:  Biochemistry       Date:  2009-03-31       Impact factor: 3.162

7.  Conformational stability and membrane interaction of the full-length ectodomain of HIV-1 gp41: implication for mode of action.

Authors:  Naama Lev; Yael Fridmann-Sirkis; Lior Blank; Arkady Bitler; Raquel F Epand; Richard M Epand; Yechiel Shai
Journal:  Biochemistry       Date:  2009-04-14       Impact factor: 3.162

8.  Isotopically labeled expression in E. coli, purification, and refolding of the full ectodomain of the influenza virus membrane fusion protein.

Authors:  Jaime Curtis-Fisk; Ryan M Spencer; David P Weliky
Journal:  Protein Expr Purif       Date:  2008-06-28       Impact factor: 1.650

9.  HIV-1 envelope glycoprotein-mediated fusion and pathogenesis: implications for therapy and vaccine development.

Authors:  Amy Jacobs; Himanshu Garg; Mathias Viard; Yossef Raviv; Anu Puri; Robert Blumenthal
Journal:  Vaccine       Date:  2008-01-10       Impact factor: 3.641

10.  A critical evaluation of the conformational requirements of fusogenic peptides in membranes.

Authors:  Johannes Reichert; Dorit Grasnick; Sergii Afonin; Jochen Buerck; Parvesh Wadhwani; Anne S Ulrich
Journal:  Eur Biophys J       Date:  2006-11-07       Impact factor: 2.095

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  25 in total

1.  Irregular structure of the HIV fusion peptide in membranes demonstrated by solid-state NMR and MD simulations.

Authors:  Dorit Grasnick; Ulrich Sternberg; Erik Strandberg; Parvesh Wadhwani; Anne S Ulrich
Journal:  Eur Biophys J       Date:  2011-01-28       Impact factor: 1.733

Review 2.  Biochemistry and biophysics of HIV-1 gp41 - membrane interactions and implications for HIV-1 envelope protein mediated viral-cell fusion and fusion inhibitor design.

Authors:  Lifeng Cai; Miriam Gochin; Keliang Liu
Journal:  Curr Top Med Chem       Date:  2011-12       Impact factor: 3.295

3.  HIV gp41 six-helix bundle constructs induce rapid vesicle fusion at pH 3.5 and little fusion at pH 7.0: understanding pH dependence of protein aggregation, membrane binding, and electrostatics, and implications for HIV-host cell fusion.

Authors:  Kelly Sackett; Allan TerBush; David P Weliky
Journal:  Eur Biophys J       Date:  2011-01-11       Impact factor: 1.733

4.  Solid-state nuclear magnetic resonance measurements of HIV fusion peptide 13CO to lipid 31P proximities support similar partially inserted membrane locations of the α helical and β sheet peptide structures.

Authors:  Charles M Gabrys; Wei Qiang; Yan Sun; Li Xie; Scott D Schmick; David P Weliky
Journal:  J Phys Chem A       Date:  2013-02-28       Impact factor: 2.781

5.  Solid-state nuclear magnetic resonance (NMR) spectroscopy of human immunodeficiency virus gp41 protein that includes the fusion peptide: NMR detection of recombinant Fgp41 in inclusion bodies in whole bacterial cells and structural characterization of purified and membrane-associated Fgp41.

Authors:  Erica P Vogel; Jaime Curtis-Fisk; Kaitlin M Young; David P Weliky
Journal:  Biochemistry       Date:  2011-10-31       Impact factor: 3.162

6.  Full-length trimeric influenza virus hemagglutinin II membrane fusion protein and shorter constructs lacking the fusion peptide or transmembrane domain: Hyperthermostability of the full-length protein and the soluble ectodomain and fusion peptide make significant contributions to fusion of membrane vesicles.

Authors:  Punsisi U Ratnayake; E A Prabodha Ekanayaka; Sweta S Komanduru; David P Weliky
Journal:  Protein Expr Purif       Date:  2015-08-19       Impact factor: 1.650

7.  Quantitation of recombinant protein in whole cells and cell extracts via solid-state NMR spectroscopy.

Authors:  Erica P Vogel; David P Weliky
Journal:  Biochemistry       Date:  2013-06-17       Impact factor: 3.162

8.  REDOR solid-state NMR as a probe of the membrane locations of membrane-associated peptides and proteins.

Authors:  Lihui Jia; Shuang Liang; Kelly Sackett; Li Xie; Ujjayini Ghosh; David P Weliky
Journal:  J Magn Reson       Date:  2015-04       Impact factor: 2.229

Review 9.  Magic angle spinning NMR of viruses.

Authors:  Caitlin M Quinn; Manman Lu; Christopher L Suiter; Guangjin Hou; Huilan Zhang; Tatyana Polenova
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2015-02-16       Impact factor: 9.795

10.  Combination of ¹⁵N reverse labeling and afterglow spectroscopy for assigning membrane protein spectra by magic-angle-spinning solid-state NMR: application to the multidrug resistance protein EmrE.

Authors:  James R Banigan; Anindita Gayen; Nathaniel J Traaseth
Journal:  J Biomol NMR       Date:  2013-03-29       Impact factor: 2.835

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